DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-eta and nptn

DIOPT Version :9

Sequence 1:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_012822135.1 Gene:nptn / 733721 XenbaseID:XB-GENE-1011670 Length:407 Species:Xenopus tropicalis


Alignment Length:364 Identity:83/364 - (22%)
Similarity:133/364 - (36%) Gaps:65/364 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LSVILLLILMSQQC--YPQRVEVPAEVIVDPKFSSPIVNMTAPVGRDAF-LTCVVQDLGPYKVAW 76
            ||.||.|.|:...|  :|.    || ...:..|....::.|...| ||| |.|.|......::.|
 Frog     9 LSAILPLGLLLGYCGLFPG----PA-CAQNAGFVKSPMSETKLTG-DAFELYCEVVGYPTPEIQW 67

  Fly    77 LRVD---TQTILTIQNHVITKNQRIGIANSEHKTWTMRIKDIKESDKGWYMCQINTDPMKSQMGY 138
            ...:   .::...:.:....:...||.|...:....:||..:...|.|.|.|:.:.||.::    
 Frog    68 WYAEVNRAESFKQLWDGARKRRVTIGAAYGANGVSVLRITRLTLEDSGTYECRASNDPRRN---- 128

  Fly   139 LDVVVPPDILDYPTSTDMVVREGSNVTLKCAATGSPEPTITWRRESGVPIELATGEEVMSIEG-- 201
                   |:...|..|.:..:...:|.||...:.:.|.||. :..:..||.|.....|.|.:|  
 Frog   129 -------DLRQNPAMTWIRAQATVSVLLKPKISATEEITIK-KDTTPTPIFLQCNLTVTSSQGEL 185

  Fly   202 -----------------------TDLVIPNVRRHHMGAYLCIAS--NGVPPSVSKRITLVVHFPP 241
                                   .:|.|...:....|.|:|:.:  |..||:   ..|:.|...|
 Frog   186 ESVYWTKNGLEVQDTRKNSPEFVMELKIAKPKADDSGEYMCVFTFKNNSPPA---NATIEVKAVP 247

  Fly   242 MITVQNQLIGAVEGKGVTLDCESEAYPKSINYWTRERGEIVPPGGKYSANVTE----IGGYRNSM 302
            .|:...:.....||:...|.|:...||.....|.:     :..||....|...    |....|:.
 Frog   248 EISGHKKSENKNEGQEAILYCKCVGYPPPDWTWYK-----ITDGGLTEVNNASGRIFITNKDNNT 307

  Fly   303 RLH-INPLTQAEFGSYRCVAKNSLGDTDGTIKLYRIPPN 340
            .|. ||.....:.|:|.|.|.|::| :|.|..:.|:..|
 Frog   308 ELRIINLDINNDPGTYLCNASNTVG-SDNTTTILRVRSN 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 20/93 (22%)
IG_like 51..137 CDD:214653 20/89 (22%)
IG_like 153..237 CDD:214653 22/110 (20%)
Ig 161..224 CDD:299845 17/89 (19%)
IG_like 252..335 CDD:214653 23/87 (26%)
Ig 258..333 CDD:143165 21/79 (27%)
nptnXP_012822135.1 Ig 51..124 CDD:319273 14/72 (19%)
Ig <190..238 CDD:386229 8/50 (16%)
Ig 259..342 CDD:386229 23/88 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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