DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-eta and lsamp

DIOPT Version :9

Sequence 1:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001034921.1 Gene:lsamp / 664692 ZFINID:ZDB-GENE-090108-1 Length:333 Species:Danio rerio


Alignment Length:288 Identity:94/288 - (32%)
Similarity:135/288 - (46%) Gaps:23/288 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 NMTAPVGRDAFLTCVVQDLGPYKVAWLRVDTQTILTIQNHVITKNQRIGIANSEHKTWTMRIKDI 115
            |:|...|....:.|.|.| ...|||||  :...|:.......:.:.|:.:.......:::||:.:
Zfish    36 NITIRQGDTTVIRCYVDD-KVSKVAWL--NRSNIIFAGEDKWSLDPRVELVTQGQLEYSLRIQKV 97

  Fly   116 KESDKGWYMCQINT-DPMKSQMGYLDVVVPPDILDYPTSTDMVVREGSNVTLKCAATGSPEPTIT 179
            ...|:|.|.|.|.| ...|:...||.|.||..|  |..|.|:.|.|||||.|.|.|.|.|:|.||
Zfish    98 DVFDEGPYTCSIQTKQQSKTSQVYLIVQVPAII--YKVSEDITVNEGSNVALTCLANGRPDPAIT 160

  Fly   180 WRRESGVPIELATGEEVMSIEGTDLVIPNVRRHHMGAYLCIASNGVPPSVSKRITLVVHFPPMIT 244
            ||.       |....|.:.: |..|.|..|.|...|.|.|.|||.|.....|.:.:||::||.|.
Zfish   161 WRL-------LNPSAEALDV-GEYLEISGVVRSQAGRYECKASNDVSTPDVKYVNVVVNYPPYIK 217

  Fly   245 VQNQLIGAVEGKGVTLDCESEAYPKSINYWTRERGEIVPPGGKYSANVT-EIGGYRNSMRLHINP 308
            .......||...|| |.||:.|.|:....|.|:...:     ..|.::| ::.|.|..  |.:..
Zfish   218 DVRSSETAVGQAGV-LHCEASAVPQPEFEWYRDERRL-----SSSQSLTIQVSGSRTV--LVVAN 274

  Fly   309 LTQAEFGSYRCVAKNSLGDTDGTIKLYR 336
            :|:.::|:|.|||.|.||..:.::.||:
Zfish   275 VTEEDYGNYTCVATNRLGVHNASVFLYK 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 24/90 (27%)
IG_like 51..137 CDD:214653 22/86 (26%)
IG_like 153..237 CDD:214653 33/83 (40%)
Ig 161..224 CDD:299845 26/62 (42%)
IG_like 252..335 CDD:214653 25/83 (30%)
Ig 258..333 CDD:143165 22/75 (29%)
lsampNP_001034921.1 Ig 34..124 CDD:299845 24/90 (27%)
IG_like 36..124 CDD:214653 24/90 (27%)
IG_like 134..197 CDD:214653 30/70 (43%)
IGc2 141..199 CDD:197706 28/65 (43%)
I-set 213..300 CDD:254352 28/94 (30%)
Ig 231..298 CDD:143165 22/74 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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