DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-eta and cadm1b

DIOPT Version :9

Sequence 1:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001107024.1 Gene:cadm1b / 562183 ZFINID:ZDB-GENE-080327-34 Length:411 Species:Danio rerio


Alignment Length:373 Identity:91/373 - (24%)
Similarity:151/373 - (40%) Gaps:83/373 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 NMTAPVGRDAFLTCVVQDLGPYKVAWLRVDTQTILTIQNHVITKNQRIGIANSEHKTWTMRIKDI 115
            |::...|..|.::|.|::.....:..|..:.|||. .::....|:.|..:.|.......:.:.::
Zfish    51 NVSVVEGETAIISCRVKNNDDSVIQLLNPNRQTIY-FRDVRPLKDSRFQLVNFSDNELLVSLSNV 114

  Fly   116 KESDKGWYMCQINTDPMKSQMGYLDVVVPP--DILDYPTSTDMVVREGSNVTLKCAATGS-PEPT 177
            ..||:|.|:||:.|||.:.....:.|:|||  .||:   |.:.:|.||:...:.|.|.|| |..|
Zfish   115 SLSDEGRYVCQLYTDPPQEAYADITVLVPPGNPILE---SREEIVSEGNETEITCTAMGSKPAST 176

  Fly   178 ITWRRESGVPIE-LATGEEVMS--IEGTDLVIPNVRRHHMG-AYLCIASNGVPPSV--------- 229
            |.|.: ...|:: .||.||:..  ...|..:...|.:...| |.:||..:   |:|         
Zfish   177 IKWMK-GDQPLQGEATVEELYDRMFTVTSRLRLTVSKEDDGVAVICIIDH---PAVKDFQAQKYL 237

  Fly   230 ----SKRITLVVHFPPMITVQNQLIGAVEGKGVTLDCESEAYPK--SINYWTRERGEIVPPGGKY 288
                ...:.:||.||..:|        .||:.:.|.|:::..|:  .|| |.:     |......
Zfish   238 EVQYKPEVKIVVGFPEGLT--------REGENLELTCKAKGKPQPHQIN-WLK-----VDDDFPS 288

  Fly   289 SANVTEIGGYRNSMRLHINPLTQAEFGSYRCVAKNSLGDTDGTIKLYRI------PPNAVNY--- 344
            .|.||       ...|.|..|.::..|:|||||.|.:|:......||..      .|..:::   
Zfish   289 HALVT-------GSDLFIENLNKSYNGTYRCVASNLVGEAYDDYILYVYDSRADGAPQKIDHAVI 346

  Fly   345 -----------------VENFEARHKGKKRTKSSESHHPARAQEHSGE 375
                             :..:.|||||...|      |.|:..:.:.:
Zfish   347 GGVVAVVVFAMLCLLIVLGRYFARHKGTYFT------HEAKGADDAAD 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 21/89 (24%)
IG_like 51..137 CDD:214653 21/85 (25%)
IG_like 153..237 CDD:214653 25/101 (25%)
Ig 161..224 CDD:299845 20/67 (30%)
IG_like 252..335 CDD:214653 23/84 (27%)
Ig 258..333 CDD:143165 21/76 (28%)
cadm1bNP_001107024.1 Ig1_Necl-2 46..140 CDD:143289 21/89 (24%)
IG_like 51..140 CDD:214653 21/89 (24%)
Ig 161..242 CDD:299845 21/84 (25%)
Ig_3 242..316 CDD:290638 26/94 (28%)
IG_like 252..329 CDD:214653 26/97 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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