DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-eta and lrit3a

DIOPT Version :9

Sequence 1:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001122166.1 Gene:lrit3a / 558559 ZFINID:ZDB-GENE-080723-63 Length:636 Species:Danio rerio


Alignment Length:234 Identity:59/234 - (25%)
Similarity:91/234 - (38%) Gaps:63/234 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LTCVVQDLGPY--KVAWLRVDTQTILTIQNHVITKNQRI-----GI---ANSEHKTWTMRIKDIK 116
            ||.|..:..||  .:.:|.:.:..:.|:.:.::.    |     ||   ||:..||      .:.
Zfish   141 LTSVPVEAAPYLINITYLDISSNKLTTLPSDLVD----IWPPFSGIQPSANTSQKT------VLG 195

  Fly   117 ESDKGWYM-CQINTDPMKSQMGYLDVVVPPDILD---------------------YPT----STD 155
            ..|..||. |:|:.....|:|..:.||:...:|.                     .||    :|.
Zfish   196 LQDNPWYCDCRISKLIELSKMAGIPVVLMDQVLTCSGPEHLSGVLFQRAELDQCVKPTVMTSATK 260

  Fly   156 MVVREGSNVTLKCAATGSPEPTITWRRESG-----VPIELATGEEVMSIEGTDLVIPNVRRHHMG 215
            :....||||.|:|.|.|.|.||:.|....|     ..::.:.||   .:..:.|.:.::.....|
Zfish   261 ITSPLGSNVLLRCDANGFPTPTLLWTTADGSVVNNTVVQESPGE---GVRWSILSLHSIVFKDAG 322

  Fly   216 AYLCIASNGVPPSVSKRITLVVH-------FPPM-ITVQ 246
            .|.|.|.| |..:....|||.|.       |||: ||.|
Zfish   323 DYRCKAKN-VAGNAEAYITLSVDGVQPTTPFPPINITKQ 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 21/89 (24%)
IG_like 51..137 CDD:214653 20/85 (24%)
IG_like 153..237 CDD:214653 26/88 (30%)
Ig 161..224 CDD:299845 20/67 (30%)
IG_like 252..335 CDD:214653
Ig 258..333 CDD:143165
lrit3aNP_001122166.1 LRR_8 81..141 CDD:290566 59/234 (25%)
leucine-rich repeat 83..106 CDD:275378
LRR_4 107..145 CDD:289563 2/3 (67%)
leucine-rich repeat 107..130 CDD:275378
LRR_8 129..>171 CDD:290566 7/29 (24%)
LRR_4 129..170 CDD:289563 7/28 (25%)
leucine-rich repeat 131..154 CDD:275378 5/12 (42%)
leucine-rich repeat 155..168 CDD:275378 1/12 (8%)
TPKR_C2 199..249 CDD:301599 9/49 (18%)
Ig 252..343 CDD:299845 28/94 (30%)
IG_like 261..343 CDD:214653 25/85 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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