DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-eta and igsf9a

DIOPT Version :9

Sequence 1:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_005155702.1 Gene:igsf9a / 557459 ZFINID:ZDB-GENE-060503-288 Length:1619 Species:Danio rerio


Alignment Length:345 Identity:81/345 - (23%)
Similarity:139/345 - (40%) Gaps:84/345 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LLLILMSQQCYPQRVEVPAEVIVDPKFSSPIVNMTAPV-GRDAFLTCVVQDLGPYKVAWLRVDTQ 82
            ||.::::..|.........|.:...|.||.::..:.|. .:|:       ....|.:.|:|....
Zfish     8 LLEVIVAVLCLFNDTSAAEEHVRAKKDSSAVLPCSLPAPQKDS-------SASQYVIEWVRQGFD 65

  Fly    83 TILTIQNHVITKNQRIGIANSEHKTW----------TMRIKDIKESDKGWYMCQI-----NTDPM 132
            |.:.:|         :|:....|..:          ::::..::..|:|||.|:|     .|:..
Zfish    66 TPIFMQ---------LGVHPRVHPDYDGRVSLFGGTSLQMSGLQLEDEGWYECRILPLDQTTEEA 121

  Fly   133 KSQMGY--LDVVVPPDILDYPTSTDMVVREGSNVTLKCAATGSPEPTITWRRESGVPIELATGEE 195
            .|...:  |.|..|| :|...:..::.|..|.::||||||.|:|.|||||.:: |.||:  ...:
Zfish   122 GSSGSWTRLSVTAPP-VLTETSPPEVEVFVGRSLTLKCAAQGNPRPTITWSKD-GAPIK--PQHK 182

  Fly   196 VMSIEGTDLVIPNVRRHHMGAYLCIASNGV-------------PPSVSKRITLVVHFPPMITVQN 247
            |..:.|: :....|.|...|.|.|..||..             ||        |:..||..||.|
Zfish   183 VKMVNGS-VSFHAVSREAAGQYQCYTSNSEGNATHVTRLKIIGPP--------VIIIPPSDTVLN 238

  Fly   248 QLIGAVEGKGVTLDCESEAYPKSINY-WTRERGEIVPPGGKYSANVTEIGGYRNSMR------LH 305
            .      .:...|.|::||.|.::.| |.|:           ..::..|...::.::      |.
Zfish   239 M------SQDAKLKCQAEADPPNMTYVWQRQ-----------GVDIYHIDSLKSRIKVIVDGTLL 286

  Fly   306 INPLTQAEFGSYRCVAKNSL 325
            |:.|...:.|:|.|:..|.|
Zfish   287 ISRLAPEDSGNYTCMPTNGL 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 18/107 (17%)
IG_like 51..137 CDD:214653 17/101 (17%)
IG_like 153..237 CDD:214653 29/96 (30%)
Ig 161..224 CDD:299845 25/62 (40%)
IG_like 252..335 CDD:214653 17/81 (21%)
Ig 258..333 CDD:143165 17/75 (23%)
igsf9aXP_005155702.1 IG_like 27..110 CDD:214653 17/98 (17%)
Ig 35..111 CDD:299845 16/91 (18%)
I-set 140..221 CDD:254352 27/84 (32%)
IGc2 151..212 CDD:197706 26/64 (41%)
Ig 233..318 CDD:299845 20/91 (22%)
I-set 233..318 CDD:254352 20/91 (22%)
Ig <349..402 CDD:299845
IG_like 423..502 CDD:214653
Ig 435..498 CDD:143165
FN3 507..602 CDD:238020
fn3 614..696 CDD:278470
PHA02666 1105..>1312 CDD:222914
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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