DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-eta and Vsig10

DIOPT Version :9

Sequence 1:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001258265.1 Gene:Vsig10 / 304529 RGDID:1565800 Length:564 Species:Rattus norvegicus


Alignment Length:476 Identity:96/476 - (20%)
Similarity:168/476 - (35%) Gaps:134/476 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VAWLRVDTQTILTIQNHVITKNQRIGIAN---SEHKTWTMRIKDIKESDKGWYMCQ--INTD--- 130
            |.|.|.|::...     :::.|..:..|.   |......:||:.::..|.|.|.|:  :|..   
  Rat    80 VTWYRNDSEPAF-----LVSSNSSLPPAAPRFSLEDAGALRIEALRLEDDGNYTCREVLNETHWF 139

  Fly   131 PMKSQMGYLDVVVPPDILD--------YPTSTDMVVREGSNVTLKCAATGSPEPTITWRRESGVP 187
            |::     |.|...|..:|        .|..| :....||.|...|.:...|.|.:.|..::...
  Rat   140 PVQ-----LRVT
SGPAHIDVNISATGTLPNGT-LYAARGSQVDFSCCSAAQPPPEVEWWIQTHSS 198

  Fly   188 IELATGEEVMSIEGTDLVIPNVRRHHMGAYLCIASNGVPPSVSKRIT--LVVHFPPMITVQNQLI 250
            :..:.|:   ::......:..:.::..|.|.|.|:| |.....:::|  |:|::||....|....
  Rat   199 VSESLGK---NLSANSFTLMLMSKNLQGNYTCSATN-VLSRRQRKVTTELLVYWPPPSAPQCSAG 259

  Fly   251 GAVEGKGVTLDCESE-AYPKSINYWTRERGEIVPPGGKYSANVTEIGGYRNSMRLHINPLTQAEF 314
            .:.|...:.|.|..: .||.....||.|.|.:|            :|   ||....::|...:|.
  Rat   260 LSPESANLELTCNWDGGYPDPTFLWTEEPGGVV------------VG---NSKLQTLSPSQLSEG 309

  Fly   315 GSYRCVAKNSLGDTDGTIKLYRI-----------------------------PPNAVNYVENF-- 348
            ..::||..:.||...|...:.:|                             ||..:.::.|.  
  Rat   310 KKFKCVGSHILGPESGASCVVQISSPLLASRPMKTCLVGGDVTLTCQVEGANPPARIQWLRNLTQ 374

  Fly   349 -------EARHKGKKRTKSSESHHPARAQEHSGE----DMENP-GKRKADLSLGAE---SIDSIY 398
                   .:|:...::.:||.......:|:..|.    ..||| |.|.||:.|..:   ::..|.
  Rat   375 PETAIQPSSRYVITQQGQSSSLTIHNCSQDQDGGFYFCRAENPVGVRAADIWLSVKEPLNVGGIV 439

  Fly   399 GN-------------------------SAAGSRRRQDLGGVLLLL----------LPVAVAVAMS 428
            |.                         .|..:.|.||:|.|::|:          ...|:|..:.
  Rat   440 GTVVSLLLLGLAIVSGLMLYYSPAFCWKAGSTLRGQDMGDVMVLVDSEEEEEEEENKGALAEVVG 504

  Fly   429 LATAGVMRETQMTLPPQTLTH 449
            ..|    |||:..||.:...|
  Rat   505 QET----RETEEELPKEIGKH 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 16/74 (22%)
IG_like 51..137 CDD:214653 15/70 (21%)
IG_like 153..237 CDD:214653 17/85 (20%)
Ig 161..224 CDD:299845 12/62 (19%)
IG_like 252..335 CDD:214653 20/83 (24%)
Ig 258..333 CDD:143165 19/75 (25%)
Vsig10NP_001258265.1 Ig 60..146 CDD:299845 16/75 (21%)
IG_like 60..145 CDD:214653 16/74 (22%)
IG_like 165..246 CDD:214653 17/85 (20%)
Ig 175..241 CDD:143165 12/69 (17%)
Ig_3 255..318 CDD:290638 18/77 (23%)
IG_like 347..429 CDD:214653 16/81 (20%)
Ig 351..426 CDD:143165 15/74 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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