DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-eta and ncam1a

DIOPT Version :9

Sequence 1:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_009293555.1 Gene:ncam1a / 30447 ZFINID:ZDB-GENE-990415-31 Length:1010 Species:Danio rerio


Alignment Length:458 Identity:110/458 - (24%)
Similarity:176/458 - (38%) Gaps:119/458 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 VNMTAPVGRDAFLTCVVQDLGPYKVAWLRVDTQTILTIQNHVITKNQRIGIANSEHKTWTMRIKD 114
            :|.||.:.:...|.|.........|.|.|.:|:         :..:::..: |.:....|  |||
Zfish   218 LNATADINQAVTLACHADGYPEPTVKWARGNTE---------LESDEKYSL-NEDGSELT--IKD 270

  Fly   115 IKESDKGWYMC-QINTDPMKSQMGYLDVVVPPDI--LDYPTSTDMVVREGSNVTLKCAATGSPEP 176
            :.:.|:|.|.| ..|....:|:...|:|.|.|.|  |:..|::::    ...:||.|.|||.|.|
Zfish   271 VNKLDEGDYKCIARNKAGERSEEVTLNVFVQPKITFLENQTASEL----EEQITLTCEATGDPTP 331

  Fly   177 TITWR--RESGVPIELAT---GEEVMSIEG----------TDLVIPNVRRHHMGAYLCIASNGVP 226
            .|.|.  |......|.|:   .|:..|::|          :.|.:..|:....|.|||.|.|.:.
Zfish   332 NIIWSFGRRVFTENEQASWTRPEKHKSLDGNVVVRSDARVSSLTLKYVQFTDAGQYLCTARNSIG 396

  Fly   227 PSVSKRITLVVHFPPMITVQNQLIGAVEGKGVTLDCESEAYPKSINYWTRERGEIVPPGGKYSAN 291
            ..: :.:.|.|.:.|.|. ..|.:...||....:.||:.|:|.:...|.|: |:.:|     |||
Zfish   397 QDI-QSMYLEVRYAPKIQ-GPQAVFTWEGNPANITCEALAHPGASVLWFRD-GQQLP-----SAN 453

  Fly   292 VTEIGGYRNS--MRLHINPLTQAEFGSYRCVAKNSLG-----------DTDGTIKLYRIPPNAVN 343
            .|.:..|...  ..|.:.|.:|.:||||.|.|.|.:|           |......:.|:.|.:..
Zfish   454 TTNVKIYNTPTVSFLEVTPDSQNDFGSYNCTATNVIGTESKEFILVQADVPSAPSIERVEPYSST 518

  Fly   344 YVENFE----------ARHKGKKRTKSSESHHPARAQEHSGEDMENPGKRKADLSLGAE------ 392
            .:..||          .::|.:.|.              :|:|..:   |:.:|..|..      
Zfish   519 AMIEFEEPASSGGVPVLKYKAEWRI--------------AGQDWTD---REYELEDGLNLITIVG 566

  Fly   393 ---------SIDSIYG-----NSAAGSRRRQDLGGVLLLLLPVAVAVAMSLATAGVMRETQMTLP 443
                     .|.:|.|     :||..|.:.|          ||.:...||       .||..::|
Zfish   567 LKPETTYEVKISAINGKGEGESSAPESFKTQ----------PVRLPFRMS-------PETPTSIP 614

  Fly   444 PQT 446
            |.|
Zfish   615 PTT 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 21/90 (23%)
IG_like 51..137 CDD:214653 20/86 (23%)
IG_like 153..237 CDD:214653 25/98 (26%)
Ig 161..224 CDD:299845 23/77 (30%)
IG_like 252..335 CDD:214653 27/95 (28%)
Ig 258..333 CDD:143165 25/87 (29%)
ncam1aXP_009293555.1 Ig 20..112 CDD:299845
I-set 21..111 CDD:254352
IG_like 121..200 CDD:214653
IGc2 128..189 CDD:197706
Ig 208..301 CDD:299845 22/94 (23%)
IG_like 219..298 CDD:214653 21/90 (23%)
Ig 300..406 CDD:299845 30/110 (27%)
IG_like 308..406 CDD:214653 26/102 (25%)
ig 413..498 CDD:278476 27/91 (30%)
IG_like 415..498 CDD:214653 27/88 (31%)
fn3 505..589 CDD:278470 14/100 (14%)
FN3 624..715 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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