DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-eta and Lrit3

DIOPT Version :9

Sequence 1:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001274153.1 Gene:Lrit3 / 242235 MGIID:2685267 Length:681 Species:Mus musculus


Alignment Length:535 Identity:115/535 - (21%)
Similarity:182/535 - (34%) Gaps:152/535 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQSN--FCQCR-KQTCALS------VILL--LILMSQQCYPQRVE------VPAEVIVDPKFSSP 48
            :|.|  ||.|. .:...||      |:||  |::.|:   |:|.:      |..|..:.|.....
Mouse   198 LQDNPWFCDCHISKVIELSKVTDHAVVLLDPLMVCSE---PERFQGILFQRVELEKCLKPSVMMS 259

  Fly    49 IVNMTAPVGRDAFLTCVVQDLGPYKVAWLRVDTQTILTIQNH-VITKNQRIGIANSEHKTWT-MR 111
            ...:|:.:|.:..|.|..:.....::.|.|.|..|:    |: ||.::...||      .|: :.
Mouse   260 ATKITSALGSNVLLRCDAKGHPTPQLTWTRSDGSTV----NYTVIQESPGEGI------RWSIIS 314

  Fly   112 IKDIKESDKGWYMCQINTDPMKSQMGYLDVVVPPDILDYPTST---DMVVRE------------- 160
            :..|...|.|.|.|:     .|:..|..:.||...::...|:|   |...|.             
Mouse   315 LTSISHKDAGDYRCK-----AKNLAGISEAVVTVTVVGGVTTTLSPDSSERSPGEPPEQHPQPGL 374

  Fly   161 -GSNVTLK-------CAATGSPEP-----TITWR-RESGVPIELATGEEVMSIEGTDLVIPNVRR 211
             ||....|       .:|...|.|     |.||. ..|.:|...:......|:: |.:.....|.
Mouse   375 GGSTPPSKSWLSPGLTSAPSYPTPSAALYTSTWSPPPSSLPPIFSAASATTSVQ-TSISGRTART 438

  Fly   212 HHMGAYL--------CIASNG--VPP-SVSKR--ITLVVHFPPM---ITVQNQLIGAVEGKGVTL 260
            .|....|        .|..||  .|| |.||:  :.|:....||   :|:::..:....|..|||
Mouse   439 SHQPPLLHPGGKSNAKIEKNGRKFPPLSASKKEELALLDQAAPMETNVTIKDLRVARETGVSVTL 503

  Fly   261 --DCESEAYPKSINYWTRERGE---IVPPGGKYSANVTEIGGYRNSMRLHINPLTQAEFGSYRCV 320
              :..|.....|:.....:.||   ::.....|..|...|.|        :.|.:|    ...||
Mouse   504 MWNSSSSTQESSVTVLYSKYGEKDLLLVNADDYGKNQATING--------LEPGSQ----YVACV 556

  Fly   321 AKNSLGDTDGTIKLYRIPPNAVNYVENFEARHKGK-------------------------KRTKS 360
            ....:|..:.....:     :.|.||.     :|.                         |..|.
Mouse   557 CPKGVGPREDLCITF-----STNRVEG-----RGSQWSLLLVVTSTACVIVVPLICFLLYKVCKL 611

  Fly   361 SESHHPARAQEHSGE---DMENPGKRKADLSLGAESIDSIYGNSAAGSRRRQDLGGVLLLLLPVA 422
            ..:..|...::.|.|   ..|.       ||..::||..::      :||.:|.|..|||....:
Mouse   612 QCTSDPFWEEDLSKETYIQFET-------LSPRSQSIGELW------TRRHRDDGERLLLCSQSS 663

  Fly   423 VAVAMSLATAGVMRE 437
            |...|:|.:.|...|
Mouse   664 VDSQMNLKSDGCRTE 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 21/91 (23%)
IG_like 51..137 CDD:214653 20/87 (23%)
IG_like 153..237 CDD:214653 28/126 (22%)
Ig 161..224 CDD:299845 17/83 (20%)
IG_like 252..335 CDD:214653 17/87 (20%)
Ig 258..333 CDD:143165 16/79 (20%)
Lrit3NP_001274153.1 LRR 1. /evidence=ECO:0000255 56..79
LRR_8 61..117 CDD:290566
LRR 2. /evidence=ECO:0000255 80..103
leucine-rich repeat 83..106 CDD:275378
LRR 3. /evidence=ECO:0000255 104..128
LRR_8 105..165 CDD:290566
LRR_4 106..146 CDD:289563
leucine-rich repeat 107..130 CDD:275378
LRR_4 129..170 CDD:289563
LRR 4. /evidence=ECO:0000255 129..151
leucine-rich repeat 131..154 CDD:275378
LRR 5. /evidence=ECO:0000255 152..175
leucine-rich repeat 155..168 CDD:275378
Ig 254..335 CDD:299845 21/95 (22%)
IG_like 263..339 CDD:214653 21/90 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..391 7/40 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..464 8/39 (21%)
FN3 489..563 CDD:238020 16/85 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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