DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-eta and DSCAM

DIOPT Version :9

Sequence 1:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001380.2 Gene:DSCAM / 1826 HGNCID:3039 Length:2012 Species:Homo sapiens


Alignment Length:390 Identity:107/390 - (27%)
Similarity:169/390 - (43%) Gaps:55/390 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YPQRVEV--PAEVIVDPKFSSPIVNMTAPVGRDAFLTCVVQDLGPYKVAWLRVDTQTILTIQNHV 91
            |..|:.|  ||.:       .|:.|:||..|||.::.|.|.....|.:.|.:  ...:|.. || 
Human   495 YQARINVRGPASI-------RPMKNITAIAGRDTYIHCRVIGYPYYSIKWYK--NSNLLPF-NH- 548

  Fly    92 ITKNQRIGIANSEHKTWTMRIKDI-KESDKGWYMCQINTDPM--KSQMGYLDVVVPPDI--LDYP 151
                :::...|:    .|:::.|: ||.|:|.|.|.:...|.  .||..::.|.|||.|  .::|
Human   549 ----RQVAFENN----GTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQPFEFP 605

  Fly   152 TSTDMVVREGSNVTLKCAATGSPEP-TITWRRESGVPIELATGEEVMSIEGT-DLVIPNVRRHHM 214
            ..:     .|..|.:.|.......| ||||::: |.||..:.|..:.:|:.| .|.|.|:...|.
Human   606 RFS-----IGQRVFIPCVVVSGDLPITITWQKD-GRPIPGSLGVTIDNIDFTSSLRISNLSLMHN 664

  Fly   215 GAYLCIASNGVPPSVSKRITLVVHFPPMITVQNQLIGAVEGKGVTLDCESEAYPKSINYWTRERG 279
            |.|.|||.|.. .:|..:..|:|..||...||.:....:.||.|.|:|.:|.||.....|...:|
Human   665 GNYTCIARNEA-AAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKG 728

  Fly   280 EIVPPGGKYSAN----VTEIGGYRNSMRLHINPLTQAEFGSYRCVAKNSLGDTDGTIKLY---RI 337
            ..||.....:.|    |...|.      |.|..:.:.:.|.|.|...|.:| .|.:..:|   :|
Human   729 AGVPQFQPIALNGRIQVLSNGS------LLIKHVVEEDSGYYLCKVSNDVG-ADVSKSMYLTVKI 786

  Fly   338 PPNAVNYVENFEARHKGKKRTKSSESH--HPARAQEHSGEDMENPGKRKADLS---LGAESIDSI 397
            |....:| .|.....:|:|:..|..:|  .|...:....:.:.||...:..:|   :|.|.|.::
Human   787 PAMITSY-PNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMARYLVSTKEVGEEVISTL 850

  Fly   398  397
            Human   851  850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 25/92 (27%)
IG_like 51..137 CDD:214653 25/88 (28%)
IG_like 153..237 CDD:214653 26/85 (31%)
Ig 161..224 CDD:299845 23/64 (36%)
IG_like 252..335 CDD:214653 23/86 (27%)
Ig 258..333 CDD:143165 21/78 (27%)
DSCAMNP_001380.2 Ig 45..113 CDD:319273
I-set 235..310 CDD:254352
I-set 315..385 CDD:333254
Ig_3 407..488 CDD:316449
IGc2 518..575 CDD:197706 18/68 (26%)
I-set 596..686 CDD:333254 30/96 (31%)
Ig_DSCAM 707..784 CDD:143211 22/83 (27%)
Ig 802..889 CDD:325142 11/49 (22%)
FN3 885..978 CDD:238020
FN3 986..1083 CDD:238020
FN3 1091..1184 CDD:238020
FN3 1189..1278 CDD:238020
Ig 1303..1369 CDD:319273
FN3 1380..1470 CDD:238020
FN3 1486..1555 CDD:238020
Required for netrin-mediated axon repulsion of neuronal growth cones. /evidence=ECO:0000250|UniProtKB:Q9ERC8 1617..2012
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1718..1810
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1855..1883
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1971..2012
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.