DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-eta and igcm-2

DIOPT Version :9

Sequence 1:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001362087.1 Gene:igcm-2 / 180913 WormBaseID:WBGene00020130 Length:802 Species:Caenorhabditis elegans


Alignment Length:425 Identity:100/425 - (23%)
Similarity:167/425 - (39%) Gaps:108/425 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 YKVAWLRVDTQTILTI----QNHV-------ITKNQRIGIANSEHKTWTMRIKDIKESDKGWYMC 125
            :.:.| |.|.|.||:.    |.||       :.::..:||.          |..:.:.|.|.|.|
 Worm    45 FSLDW-RKDGQLILSAFGQEQGHVTPTLQGRLARDGFLGIT----------IHSVTDGDAGVYQC 98

  Fly   126 QIN------TDPMKSQMGYLDVVVPPDILDYPTSTDMVVRE-GSNVTLKCAATGSPEPTITWRRE 183
            .:.      |.|.|.....|.|.|||.|:. |:...::.:: |:::..:|.|.|:|.|.|||.| 
 Worm    99 IVT
KFSKQPTRPEKGLSAKLVVNVPPVIIS-PSKNAIIHKKVGADLIFECKAEGAPSPEITWSR- 161

  Fly   184 SGVPIELATGEEVMSIEGTDLVIPNVRRHHMGAYLCIASN---GVPPSVSKRIT--LVVHFPPMI 243
                     .|:::|.... |.:.|:.....|.|.|:|.|   ....|:..|.|  .::...|: 
 Worm   162 ---------NEQIISTSPV-LTLSNLEEGDKGLYTCLAVNIEGNSTSSIDVRFTKATILDLIPL- 215

  Fly   244 TVQNQLIGAVEGKGVTLDCESEAYPKSINY-WTRERGEIVPPGGKYSANVTEIGGYRNSMR---L 304
               |:.:  :||..|...|.:.|...:|:| |..|:..|         ..|.: |.|:::|   |
 Worm   216 ---NKTV--IEGSNVFWHCHANAQATAISYSWLFEKKPI---------KTTSL-GLRSNIRSGDL 265

  Fly   305 HINPLTQAEFGSYRCVAKNSLGDTDGTIKLYRI--PPNAVNYVENFEARHKGKKRTKS------- 360
            .:..:.:::.|.|.|.||||.|:|..:.....:  ||..::..:..:....|:..|.|       
 Worm   266 SLQDVRKSDSGWYTCEAKNSAGETTSSTAYLHVFYPPEPLSSHQPVQTVASGRNTTVSCDVIANP 330

  Fly   361 -------SESHH--PARAQEHSGEDMENPGKRKADLSLGAESIDSIYG---NSAAGSRRRQDLGG 413
                   |::.|  |.:|..|.......||.            ..|||   ::.||.      |.
 Worm   331 TPTSYTWSKNGHYLPTQASSHIIISYAKPGD------------GGIYGCQADNIAGK------GS 377

  Fly   414 VLLLLLPVAVAVAMSLATAG---VMRETQMTLPPQ 445
            ::...|.||.....::|...   |....|:::|.|
 Worm   378 IVETHLIVAEPPVFTVAPPSEIKVRLGDQVSIPCQ 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 20/85 (24%)
IG_like 51..137 CDD:214653 19/81 (23%)
IG_like 153..237 CDD:214653 22/89 (25%)
Ig 161..224 CDD:299845 19/65 (29%)
IG_like 252..335 CDD:214653 24/86 (28%)
Ig 258..333 CDD:143165 22/78 (28%)
igcm-2NP_001362087.1 IG_like 23..101 CDD:214653 16/66 (24%)
Ig 124..200 CDD:386229 22/87 (25%)
IG_like 214..298 CDD:214653 26/99 (26%)
Ig_3 309..371 CDD:372822 13/73 (18%)
Ig 389..467 CDD:386229 5/24 (21%)
FN3 476..548 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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