DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-eta and Dscaml1

DIOPT Version :9

Sequence 1:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001074739.2 Gene:Dscaml1 / 114873 MGIID:2150309 Length:2053 Species:Mus musculus


Alignment Length:444 Identity:111/444 - (25%)
Similarity:170/444 - (38%) Gaps:113/444 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YPQRVEVPAEVIVDPKFSSPIVNMTAPVGRDAFLTCVVQDLGPYKVAWLRVDTQTILTIQNH--V 91
            |..|:.|..     |.....:.|:||..|||..:.|.|.....|.:.|.:   ..:|...||  |
Mouse   496 YQARINVRG-----PPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYK---DALLLPDNHRQV 552

  Fly    92 ITKNQRIGIANSEHKTWTMRIKDI-KESDKGWYMCQINTDPMK--SQMGYLDVVVPPDI--LDYP 151
            :.:|            .|:::.|: |..|:|.|:|.:...|..  ||..::.|.|||.|  .::|
Mouse   553 VFEN------------GTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQPFEFP 605

  Fly   152 TSTDMVVREGSNVTLKCAATGSPEP-TITWRRE-------SGVPIELATGEEVMSIEGTDLVIPN 208
            .::     .|..:.:.|..:....| .||||::       |||.||   .:|.||    .|.|.:
Mouse   606 PAS-----IGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIE---SKEFMS----SLQISS 658

  Fly   209 VRRHHMGAYLCIASNGVPPSVSKRITLVVHFPPMITVQNQLIGAVEGKGVTLDCESEAYPKSINY 273
            |...|.|.|.|||||.. .:||:...|:|..||...||......:.||...|:|..:.||.....
Mouse   659 VSLKHNGNYTCIASNAA-ATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVM 722

  Fly   274 WTRERGEIVPPGGKYSANVTEIGGYRNSMRLHINPLT-----------------QAEFGSYRCVA 321
            |...:|.                  .|..:.|..|||                 :.:.|.|.|.|
Mouse   723 WKHAKGS------------------GNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQA 769

  Fly   322 KNSLGDTDGTIKLY---RIP------PNAVNYVE------NFEAR---------HKGKKRTKSSE 362
            .|.:| ||.:..::   :||      ||....::      |..||         .||........
Mouse   770 SNGVG-TDISKAMFLTVKIPAMITSHPNTTIAIKGHPKELNCTARGERPIIIRWEKGDTVIDPDR 833

  Fly   363 SHHPARAQEHSGEDMENPGKRKADLSLGAESIDSIYGNSAAGSRRRQDLGGVLL 416
            ....|.|.:.:|:::.:..|.|.     |:..||::.:..|.:...:|.|.:.|
Mouse   834 VMRYAIATKDNGDEVVSTLKLKP-----ADRGDSVFFSCHAINSYGEDRGLIQL 882

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 25/94 (27%)
IG_like 51..137 CDD:214653 25/90 (28%)
IG_like 153..237 CDD:214653 29/91 (32%)
Ig 161..224 CDD:299845 25/70 (36%)
IG_like 252..335 CDD:214653 21/99 (21%)
Ig 258..333 CDD:143165 19/91 (21%)
Dscaml1NP_001074739.2 IGc2 43..110 CDD:197706
Ig 125..218 CDD:353325
I-set 226..311 CDD:336764
Ig_3 317..389 CDD:339005
Ig 408..498 CDD:353325 1/1 (100%)
IGc2 519..577 CDD:197706 19/72 (26%)
Ig 615..681 CDD:319273 27/73 (37%)
Ig_DSCAM 707..785 CDD:143211 19/96 (20%)
Ig 803..891 CDD:353325 17/85 (20%)
FN3 887..981 CDD:238020
FN3 988..1085 CDD:238020
FN3 1093..1186 CDD:238020
FN3 1191..1282 CDD:238020
Ig 1307..1377 CDD:319273
FN3 1384..1474 CDD:238020
FN3 1488..1560 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1716..1741
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1773..1803
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1840..1862
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1974..2053
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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