DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-eta and ntm

DIOPT Version :9

Sequence 1:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_004916061.1 Gene:ntm / 100492453 XenbaseID:XB-GENE-6045425 Length:374 Species:Xenopus tropicalis


Alignment Length:413 Identity:116/413 - (28%)
Similarity:185/413 - (44%) Gaps:79/413 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 MSQQCYPQRVEVPAEVIVDPKFSSPIVNMTAPVGRDAFLTCVVQDLGPYKVAWLRVDTQTILTIQ 88
            |:..|..|.|.|.:.   |..|...:.|:|...|..|.|.|.| |....:||||  :..|||...
 Frog    21 MAVLCLLQGVPVRSG---DAGFPKAMDNVTVRQGDSAILRCTV-DNRVTRVAWL--NRSTILYTG 79

  Fly    89 NHVITKNQRIGIANSEHKTWTMRIKDIKESDKGWYMCQINTD--PMKSQMGYLDVVVPPDILDYP 151
            |...:.:.|:.:..:....:::.|:::...|:|.|.|.:.||  |..|:: :|.|.|||.|:|  
 Frog    80 NDKWSIDPRVVLLANTKSQYSIEIQNVDIYDEGPYTCSVQTDNHPKTSRV-HLIVQVPPRIVD-- 141

  Fly   152 TSTDMVVREGSNVTLKCAATGSPEPTITWRRESGVPIELATGEEVMSIEGTDLVIPNVRRHHMGA 216
            .|:.:.|.|||||:|.|.|.|.|||.:.||..|.......:.:|.:.|.|       :.|...|.
 Frog   142 ISSSIAVNEGSNVSLICIANGRPEPVVNWRYLSPKARGFVSEDEYLEITG-------ITREQSGI 199

  Fly   217 YLCIASNGVPPSVSKRITLVVHFPPMITVQNQLIGAVEGKGVTLDCESEAYPKSINYWTRE---- 277
            |.|.|||.|.....:|:.|.|::||.| :..|.|||..|....|.||:.|.|.:..:|.:|    
 Frog   200 YECSASNDVSAPDVRRVKLTVNYPPYI-LDAQNIGAPLGHRGILQCEASAVPAADFFWYKEDKRL 263

  Fly   278 ----RGEIVPPGGKYSANVTEIGGYRNSMRLHINPLTQAEFGSYRCVAKNSLGDTDGTIKLYRIP 338
                ||             .::.......|:....:::.::|:|.|:|||.||.::.:|.|:   
 Frog   264 SDSWRG-------------VKVENRETISRVTFLNVSEQDYGNYTCMAKNLLGHSNASIILF--- 312

  Fly   339 PNAVNYVENFEARHKGKKRTKSSESHHPARAQEHSGEDMENPGKRKADLSLGAESIDSIY-GNSA 402
                   |.|::......:.:|:.:..|          ::.||              ::: ||| 
 Frog   313 -------ELFQSTSSPLLQEESTAALTP----------LKGPG--------------AVHDGNS- 345

  Fly   403 AGSRRRQDLGG--VLLLLLPVAV 423
             ||.:......  :||||||.::
 Frog   346 -GSTQCSFCAPLLILLLLLPFSL 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 27/91 (30%)
IG_like 51..137 CDD:214653 26/87 (30%)
IG_like 153..237 CDD:214653 30/83 (36%)
Ig 161..224 CDD:299845 23/62 (37%)
IG_like 252..335 CDD:214653 21/90 (23%)
Ig 258..333 CDD:143165 18/82 (22%)
ntmXP_004916061.1 Ig 45..133 CDD:299845 27/91 (30%)
IG_like 45..133 CDD:214653 27/91 (30%)
IG_like 143..220 CDD:214653 30/83 (36%)
IGc2 150..209 CDD:197706 25/65 (38%)
ig 227..311 CDD:278476 24/96 (25%)
IG_like 230..311 CDD:214653 24/93 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 58 1.000 Domainoid score I10578
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I4412
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 1 1.000 - - otm47726
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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