DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-eta and chl1b

DIOPT Version :9

Sequence 1:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_017212175.2 Gene:chl1b / 100318566 ZFINID:ZDB-GENE-091105-1 Length:1294 Species:Danio rerio


Alignment Length:286 Identity:76/286 - (26%)
Similarity:132/286 - (46%) Gaps:42/286 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 GRDAFLTCVVQDLGPYKVAWLRVDTQTILTIQNHVITKNQRIGIANSEHKTWTMRIKDIKESDKG 121
            |.|..|.|:.:.....||.|:::....:          .:|: :..|..|..|:.:  :.|.|:|
Zfish   276 GEDLQLECIAEGFPTPKVEWVKIGFNKL----------PERV-VVESHGKLLTVEM--VNEEDEG 327

  Fly   122 WYMCQINTDPMKSQMGYLDVVV--PPDILDYPTSTDMVVREGSNVTLKCAATGSPEPTITWRRES 184
            .|||:.. :|....:.:..|.|  ||:....|.|  .:|..|::|.:||...|:|:||:.| |.:
Zfish   328 KYMCRAK-NPHGEVVHHFHVTVEEPPEFEIEPQS--QLVTIGADVLIKCVVKGNPQPTVGW-RVN 388

  Fly   185 GVPI-ELATGEEVMSIEGTDLVIPNVRRHHMGAYLCIASNGVPPSVSKRITLVVHFPPMITVQNQ 248
            |.|: |:.|....:..:|| :.|.|....:...|.|.|:|.....::....::::..|:|..:|.
Zfish   389 GRPLNEVPTSNRKILKDGT-ISIHNANPENSAVYQCEATNKHGTILANANIMIMNIQPLILTENN 452

  Fly   249 L-IGAVEGKGVTLDCESEAYPKSINYWTRERGEIVPPGGKYSANVTEIGGYRNSMR----LHINP 308
            | ..|||||.|.:.|:..:.|.|...|::..          |||..|  |.|.::.    |.|:.
Zfish   453 LQYMAVEGKSVVMHCKVFSSPASSITWSKAD----------SANAVE--GERFTVHQNGSLEIHN 505

  Fly   309 LTQAEFGSYRCVAKNSLGDTDGTIKL 334
            :.:.:.|.|.|.|:|    |:|.:.:
Zfish   506 VMKEDMGEYSCFAQN----TEGKVAI 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 18/83 (22%)
IG_like 51..137 CDD:214653 18/79 (23%)
IG_like 153..237 CDD:214653 24/84 (29%)
Ig 161..224 CDD:299845 21/63 (33%)
IG_like 252..335 CDD:214653 25/87 (29%)
Ig 258..333 CDD:143165 20/78 (26%)
chl1bXP_017212175.2 Ig 61..135 CDD:325142
Ig 138..231 CDD:325142
Ig 279..348 CDD:325142 17/82 (21%)
Ig 366..438 CDD:325142 22/73 (30%)
IG 454..533 CDD:214652 25/90 (28%)
I-set 538..628 CDD:333254
FN3 632..722 CDD:238020
FN3 734..815 CDD:238020
FN3 832..931 CDD:238020
fn3 942..1022 CDD:306538
FN3 1070..1142 CDD:214495
Bravo_FIGEY 1196..1279 CDD:316405
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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