DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-eta and vsig10

DIOPT Version :9

Sequence 1:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001093564.2 Gene:vsig10 / 100005564 ZFINID:ZDB-GENE-030131-7476 Length:529 Species:Danio rerio


Alignment Length:430 Identity:77/430 - (17%)
Similarity:141/430 - (32%) Gaps:160/430 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SVILLLILMSQQCYPQRVEVPAEVIVDPKFSSPIVNMTAPVGRDAFLTCVVQDLGPYKVAWLRVD 80
            :|:|.|:|:|.|...:  |...:.::..|            |.:..|.|:...:....|.:....
Zfish     6 AVVLYLLLLSHQTVSE--EQVQQFVIGEK------------GNNTTLHCLDHPVNASSVLYQWKK 56

  Fly    81 TQTILTIQNHVITKNQRIGIANSEHKTWTMRIKDIKESDKGWYMCQINTDPMKS--QMGYLDVVV 143
            ...::..||   ..|..:.::.||:  ..:||..::..|:|.|.|:......:|  .:..:.:.:
Zfish    57 DGAVVATQN---PPNPSVHLSISEN--GFLRISGLQLIDEGLYECESQAKGGRSWQTLSKIQLTI 116

  Fly   144 ---PPDI-LDYPTST-----DMVVREGSNVTLKCAATGSPEPTITW----------RRESGVPIE 189
               |..: ||...:|     .:.|.:||||...|::..:|...:||          .||.|....
Zfish   117 AAGPTGVSLDISPATFLNNGTLFVHKGSNVNFSCSSESNPSQNLTWTVDNLASDNPEREFGSKSP 181

  Fly   190 LATGEEVMSIEGTDLVIPNVRRHHMGAYLCIASNGVPPSVSKRIT-----LVVHFPP-------- 241
            ||            ..|.|::....|.|.|.:.|    ::|:|..     |:|::.|        
Zfish   182 LA------------FSITNIQPLDQGTYTCTSQN----TLSRRTANKTQELLVYYAPERHPECSW 230

  Fly   242 --------------------------------------MITVQNQ-------------------- 248
                                                  .:|...|                    
Zfish   231 ELGDKPSDVLFICSWFGGYPVPTLTWQEVEGAAEGPTINLTTSQQTEELNVSVNRSILHDGDKVK 295

  Fly   249 --------------------------LIGAVEGKGVTLDC-ESEAYPKSINYWTRERGEIVPPGG 286
                                      |..|:||..:|:.| |:.:.|.:...| ::..:::....
Zfish   296 CTGHHVTGVEKSCSFTLKIPYPTGQPLATALEGTNITISCTETSSLPPAKTVW-KKNDDLIENTS 359

  Fly   287 KYSANVTEIGGYRNSMRLHINPLTQAEFGSYRCVAKNSLG 326
            ||.....     |.::.|.|..:|:|:.|.|.|.::|.||
Zfish   360 KYIVQEN-----RPALTLTIVNVTKADEGVYYCYSENPLG 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 16/91 (18%)
IG_like 51..137 CDD:214653 16/87 (18%)
IG_like 153..237 CDD:214653 24/103 (23%)
Ig 161..224 CDD:299845 18/72 (25%)
IG_like 252..335 CDD:214653 21/76 (28%)
Ig 258..333 CDD:143165 18/70 (26%)
vsig10NP_001093564.2 IG_like 28..116 CDD:214653 17/104 (16%)
Ig 32..104 CDD:299845 16/88 (18%)
IG_like 140..204 CDD:214653 20/79 (25%)
IGc2 143..203 CDD:197706 18/71 (25%)
IG_like 324..404 CDD:214653 21/77 (27%)
Ig 328..404 CDD:299845 19/73 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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