DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-eta and dscaml1

DIOPT Version :9

Sequence 1:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_005157551.1 Gene:dscaml1 / 100002762 -ID:- Length:2158 Species:Danio rerio


Alignment Length:428 Identity:108/428 - (25%)
Similarity:164/428 - (38%) Gaps:114/428 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YPQRVEVPAEVIVDPKFSSPIVNMTAPVGRDAFLTCVVQDLGPYKVAWLRVDTQTILTIQNH--V 91
            |..|:.|..     |.....:.|:||..||:.|:.|.|.....|.:.|.:   ..:|...||  |
Zfish   565 YQARINVRG-----PPSIRAMRNITAVAGRNTFINCRVIGYPYYSIKWYK---DGMLLPDNHRQV 621

  Fly    92 ITKNQRIGIANSEHKTWTMRIKDI-KESDKGWYMCQINTDPMK--SQMGYLDVVVPPDI--LDYP 151
            :.:|            .|:::.|: |..|:|.|:|.:...|..  ||..|:.|.|||.|  .|:|
Zfish   622 VYEN------------GTLKLSDVQKGMDEGAYLCSVLIQPQLSISQTVYVTVKVPPLIQPFDFP 674

  Fly   152 TSTDMVVREGSNVTLKCAATGSPEP-TITWRRE--------SGVPIELATGEEVMSIEGTDLVIP 207
            .::     .|..:.:.|..:....| .||||::        :||.||.   :|.||    .|.|.
Zfish   675 PTS-----IGKLMYIACVVSSGDMPIRITWRKDGQEIVSGTAGVTIET---KEFMS----SLQIS 727

  Fly   208 NVRRHHMGAYLCIASNGVPPSVSKRITLVVHFPPMITVQNQLIGAVEGKGVTLDCESEAYPKSIN 272
            .|...|.|.|.|||||.. .:||....|:|..||...||......:.||...|:|..|.||....
Zfish   728 KVSLKHNGNYTCIASNDA-ATVSSERQLIVTVPPRFRVQPNNQDGIYGKSEVLNCSVEGYPPPKV 791

  Fly   273 YWTRERGEIVPPGGKYSANVTEIGGYRNSMRLHINPLT-----------------QAEFGSYRCV 320
            .|...:|               ||   |..:.|..|||                 :.:.|.|.|.
Zfish   792 VWKHAKG---------------IG---NPQQYHPVPLTGRIQILSNGSLLIRHVLEEDRGYYLCQ 838

  Fly   321 AKNSLG-DTDGTIKL-YRIP------PNAVNYVENFEARHKGKKRTKSSESHHPARAQEHSGEDM 377
            |.|.:| |...::.| .:||      ||....::.     :.|:...::...:|...:...|:.:
Zfish   839 ASNGVGSDISKSMMLTVKIPAMITSHPNTTMAIKG-----QNKELNCTARGEYPIIIRWERGDTV 898

  Fly   378 ENPGK-----------RKADLSLG------AESIDSIY 398
            .:|.:           .|:|..:.      ||..||::
Zfish   899 IDPDRNPRYSITTSPNEKSDEVISTLKLKPAERGDSVF 936

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-etaNP_001188701.2 Ig 51..141 CDD:299845 26/94 (28%)
IG_like 51..137 CDD:214653 25/90 (28%)
IG_like 153..237 CDD:214653 28/92 (30%)
Ig 161..224 CDD:299845 24/71 (34%)
IG_like 252..335 CDD:214653 24/101 (24%)
Ig 258..333 CDD:143165 21/92 (23%)
dscaml1XP_005157551.1 IG_like 112..184 CDD:214653
Ig 112..183 CDD:143165
Ig 194..287 CDD:299845
I-set 302..380 CDD:254352
IGc2 309..370 CDD:197706
IGc2 399..458 CDD:197706
I-set 477..571 CDD:254352 2/5 (40%)
Ig 477..567 CDD:299845 1/1 (100%)
IG_like 581..662 CDD:214653 26/95 (27%)
IGc2 588..646 CDD:197706 19/72 (26%)
Ig 684..751 CDD:143165 26/74 (35%)
IG_like 686..756 CDD:214653 27/77 (35%)
I-set 760..855 CDD:254352 27/112 (24%)
Ig7_DSCAM 778..855 CDD:143211 22/94 (23%)
IG_like 865..956 CDD:214653 12/77 (16%)
Ig 873..963 CDD:299845 10/69 (14%)
FN3 959..1053 CDD:238020
FN3 1060..1157 CDD:238020
FN3 1165..1271 CDD:238020
FN3 1276..1367 CDD:238020
IGc2 1392..1455 CDD:197706
FN3 1486..1559 CDD:238020
FN3 1573..1649 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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