DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18266 and ccdc34

DIOPT Version :10

Sequence 1:NP_608945.1 Gene:CG18266 / 33792 FlyBaseID:FBgn0031724 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_068073479.2 Gene:ccdc34 / 555710 ZFINID:ZDB-GENE-060825-315 Length:356 Species:Danio rerio


Alignment Length:292 Identity:66/292 - (22%)
Similarity:125/292 - (42%) Gaps:47/292 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 NQGQISSRTYSLSSSGNNQN-------HDASSMSTCSWSDMYRGALQST-----DGCTGMPPLSL 279
            ::..:..|:.||.|||.:.:       ||:...|.....|.::.....|     |..    |||.
Zfish    52 SRSSVLQRSRSLESSGGSTSSLISPIYHDSFDHSEDEPEDHFQPIRNLTITLNEDAA----PLSP 112

  Fly   280 ASVVSDSSTCYKQLEEHKERPGPQAFEDWKARKAAE-----KQKNL--LAAKQEREKREAEAALR 337
            :....|::....:|...:.:  ..|:|.|...||.|     :||.:  |..|.:.:::|.|...:
Zfish   113 SRGEVDTTGLDDRLSSSQMK--LSAWEQWIVAKAKEERVRKQQKAVEELTLKDKEKEKEKEEQKK 175

  Fly   338 QKYAQEHFQEWCRRKEEQQQQQRQKQKKSSTSSSSLGSVSSSSTAPTRKVSPENTKNRLQKWEQA 402
            :..:....|||.:.|.||:::.:| .::|..|...|  ......|...:.:.|..|..|:|.:|.
Zfish   176 KVTSDCKIQEWLQMKREQEKKDKQ-SRESQKSEKQL--KEEQKRAEIERKAHEKYKEWLRKKKQE 237

  Fly   403 KREQQQQEKQRLIRLQCNKQKLEEERRQRRQGAWQNWMKQVDKRAKPVPLNQGFDTLRGTISNI- 466
            :.|::.:||....|    :...|.||:::.:.:::.|:..|  ::|.....|......|:.:|: 
Zfish   238 EAERKLREKDEAER----RLAEERERKEKAEESFKEWLDGV--KSKQKVSRQSSACSAGSYNNVN 296

  Fly   467 -----YINPVQW----VSNIDP---QDSGRSR 486
                 ::||:.|    |...:|   :.|.|.|
Zfish   297 YPSPGFVNPIPWKPIHVPKQEPSARKSSSRRR 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18266NP_608945.1 CCDC34 253..473 CDD:464032 52/237 (22%)
ccdc34XP_068073479.2 None

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