DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18266 and CG14011

DIOPT Version :10

Sequence 1:NP_608945.1 Gene:CG18266 / 33792 FlyBaseID:FBgn0031724 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_608943.1 Gene:CG14011 / 33790 FlyBaseID:FBgn0031722 Length:388 Species:Drosophila melanogaster


Alignment Length:515 Identity:131/515 - (25%)
Similarity:203/515 - (39%) Gaps:167/515 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAFVARRSSDGSVVD----------RQQVSGREKV---------RPASQSDISDEDSESLLGYTN 46
            |||:.:.:|.|:::|          :|...|:.:.         |..|::.|...|.:||:    
  Fly     1 MAFLGKVNSQGTLIDHELFCMTQPSQQDSDGQAREMGARVLLPRRKGSRTFIKTCDKDSLV---- 61

  Fly    47 HTYGAP-TVRYVGQGEDREAVEPQLDYEDFGDSLGDHADNSESETD-SILSFCKELDEEEANDAL 109
            .:.|:| ||||||..|....|                  ||..||: |.|..|.:|         
  Fly    62 RSMGSPSTVRYVGSSESSSEV------------------NSLDETETSTLRCCSDL--------- 99

  Fly   110 LNGRMSFTDEKAKVEDKANADDVFHRVMNKGDEAAATDTETVMNFDHDVQSLSSLGSCTPTVTQR 174
                                                                 |||:...|.|..
  Fly   100 -----------------------------------------------------SLGTLKSTKTIE 111

  Fly   175 GEDVDNLDNISGRTFFKEEKSHSINTRTFCKDNNLDALSGRTFYKQASVKETNQGQISSRTYSLS 239
            |..|..|.         |:......:.|.|.  :|.:.|..|        .|::...|||:...|
  Fly   112 GPRVGELG---------EDIELQTESETVCL--HLGSPSSST--------STDRSSCSSRSCPSS 157

  Fly   240 SSGNNQNHDASSMSTCSWSDMYRGALQSTDGCT---------GMPPLSLASVVSDSSTCYKQLEE 295
            .||||.:...|:.|.|||.:    |:...|...         .:|.|.|.|.|......|.:..|
  Fly   158 RSGNNSSDKDSTTSMCSWEE----AMSRDDSMLAPLELPLSHSLPSLRLGSSVGSPPLTYTRRIE 218

  Fly   296 --HKERPGPQAFEDWKARKAAEKQKNLLAAKQEREKREAEAALRQKYAQEHFQEWCRRKEEQQQQ 358
              |..|...:|:|:|.:.|..:.|..|.|.:.|||.:.....|||:.|:|.:::||::|.:|   
  Fly   219 PLHIRRSAGEAYENWLSGKQRQCQYKLQAQQAEREAQRQRTELRQRLAKEKYEQWCQQKAQQ--- 280

  Fly   359 QRQKQKKSSTSSSSLGSVSSSSTAPTRKVSPENTKNRLQKW--------EQAKREQQQQEKQRLI 415
                    :||::.|.....|:..|.:| :..:.::.||:|        ||.:.||:..|::|  
  Fly   281 --------TTSTAKLTKPDRSAQLPPQK-NMASVQHHLQEWELHKLRLLEQRRLEQRNAERRR-- 334

  Fly   416 RLQCNKQKLEEERRQRRQGAWQNWMKQVDKRAKPVPLNQGFDTLRGTISNIYINPVQWVS 475
                  |:.:..||.:.:.|:..||..|.:|.||||.:||..:||||:|:|:|||.|||:
  Fly   335 ------QEEKAARRSQAEEAFSRWMSNVAQRPKPVPSSQGMKSLRGTVSDIFINPKQWVN 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18266NP_608945.1 CCDC34 253..473 CDD:464032 72/238 (30%)
CG14011NP_608943.1 CCDC34 171..386 CDD:464032 72/238 (30%)

Return to query results.
Submit another query.