DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14011 and Ccdc34

DIOPT Version :10

Sequence 1:NP_608943.1 Gene:CG14011 / 33790 FlyBaseID:FBgn0031722 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001382531.1 Gene:Ccdc34 / 362187 RGDID:1560583 Length:376 Species:Rattus norvegicus


Alignment Length:301 Identity:76/301 - (25%)
Similarity:132/301 - (43%) Gaps:50/301 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 EGPRVGELGEDIELQTESETVCLHLGSPSSSTSTDR--SSCSSRSCPSSRSGNNSSDKDSTTSMC 173
            :||.:    ||:.|     |.||...|.|.|.||..  |....||.|.....:...|        
  Rat    41 QGPGL----EDVAL-----TECLLPPSLSCSNSTLSLLSPLGHRSFPFGEDDSEGED-------- 88

  Fly   174 SWEEAMSRDD-SMLAPLELPLSHSLPSLRL-GSSVGSPPLTYTRRIEPLHIRRSAGEAYENWLSG 236
              |||:..|. ...|.:|     ||..:.| |.|.........:..:.:.::.|:...:|.|..|
  Rat    89 --EEALDEDACESEAKVE-----SLEGMELQGRSSCEVESQDKQEEKQVLLQESSLTPWEMWFVG 146

  Fly   237 KQRQCQYKLQA-------QQAEREAQRQRTELRQRLAKEKYEQWCQQKAQQTTS--TAKLTK--P 290
            |:::.:.:||.       :|.|:..:.:..|.|:.:|:.|:::|.|:|.:|...  ..|:.|  .
  Rat   147 KEKEERGRLQQKVLEELNRQIEKRKEMEEREKRKIIAEVKHKEWVQKKNKQERKERVQKINKEME 211

  Fly   291 DRSAQLPPQKNM-ASVQHHLQEWELHKLRLLE-QRRLEQRNAERRRQEEKAARRSQAEEAFSRWM 353
            :::|:...:::: ...:...||| |.|.:..| :::.:::..|::||.|...::..||:.|..|:
  Rat   212 EKAAKKREKEHLQEKAKEKYQEW-LKKKKAEECEKKKKEKEKEKQRQAELQEKKEIAEKKFKEWL 275

  Fly   354 SNVAQRPKPVPSSQGMKS--LRGTVS------DIFINPKQW 386
            .|...:|:|...|.|..|  |.|..|      ..|.||..|
  Rat   276 ENAKNKPRPAAKSYGYSSGKLTGFYSGNSYPEPTFYNPIPW 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14011NP_608943.1 CCDC34 171..386 CDD:464032 57/237 (24%)
Ccdc34NP_001382531.1 CCDC34 93..298 CDD:464032 49/210 (23%)

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