Sequence 1: | NP_523485.3 | Gene: | GluRIIB / 33789 | FlyBaseID: | FBgn0020429 | Length: | 913 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_062182.1 | Gene: | Grik2 / 54257 | RGDID: | 2733 | Length: | 908 | Species: | Rattus norvegicus |
Alignment Length: | 932 | Identity: | 267/932 - (28%) |
---|---|---|---|
Similarity: | 452/932 - (48%) | Gaps: | 106/932 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 VLLALAIASGANEDTLVIKIGAIFFDTEM------KLADAFSAALEEVNAIN------PALKLDA 60
Fly 61 IKRYVTVDDSIVLQDISCDLIGSGVAAIFGPSSKTNSDIVEVLCNMTGIPHLQFDWHPQQSNRER 125
Fly 126 MNHQLTVNVAPMELFLSAAFSDILASKTFDWKSFTIAYERSSHLIRLQHILAWKQLHKAGIKMQE 190
Fly 191 FERG-DDYRILWKRINNAREKFVLLDCPSDILVDVINASIGYNMTGSFNHLFLTNLDTHLSGIDG 254
Fly 255 F-YSRDFTVAVAAVRI------------------RTYVPPPVHDEIDVFDNSVDTRFSSLGSQLV 300
Fly 301 YDSIVLFYNALLEISQRPGFYIPNFSCGRGF-WQPGPRLVEQMKQITPKMVKPPFKTQRLQIN-A 363
Fly 364 DGQREDFNLEVYNPIIDRVTHI--WNKEFQLVDFEKLRENSTQALKQKRLQNKEDFSQKPIRYTV 426
Fly 427 ATRVGKPYFSWREEPEGVHYEGNERFEGYAVDLIYMLAQECKFDFNFEPVRDNKYGSYDANTDEW 491
Fly 492 DGIIRQLIDNNAQIGICDLTITQARRSVVDFTVPFMQLGISILSYKEPPPKADIYAFLNPYNAEV 556
Fly 557 WLFVMIAMMITAFALIFTGRIDQYEWDQPVE-NVNREMERQNIWHLSNALWLVLGSMLNQGCDLL 620
Fly 621 PRGLPMRLLTAFWWIFALLISQTYIAKLAAFITSSKIAGDIGSLHDLVDQNKVQFGTIRGGATSV 685
Fly 686 YFSESNDTDNRMAWNKMLSFKPDAFTKNNEEGVDRVKLSKGTYAFLMETTNLQYYVQRNCELTQI 750
Fly 751 GESFGEKHYGIAVPLNADFRSNLSVGILRLSERGELFKLRNKWFNSN----ESTCDSNVPTIDDG 811
Fly 812 QFDMDSVGGLFVVLIVGVVVGLVIGVAEFLWHVQRISVKEKIPPMLALKAEFYFVIRFW--LTRK 874
Fly 875 P-------------LHTYRQSR 883 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIB | NP_523485.3 | PBP1_iGluR_Kainate | 26..393 | CDD:107377 | 98/402 (24%) |
ANF_receptor | 41..378 | CDD:279440 | 90/364 (25%) | ||
PBP2_iGluR_Kainate | 422..795 | CDD:270432 | 134/373 (36%) | ||
Lig_chan | 555..822 | CDD:278489 | 89/271 (33%) | ||
Grik2 | NP_062182.1 | Periplasmic_Binding_Protein_Type_1 | 34..414 | CDD:299141 | 101/415 (24%) |
ANF_receptor | 52..395 | CDD:279440 | 92/370 (25%) | ||
Periplasmic_Binding_Protein_Type_2 | 430..800 | CDD:304360 | 134/376 (36%) | ||
Glutamate binding. /evidence=ECO:0000269|PubMed:15721240, ECO:0000269|PubMed:17115050, ECO:0007744|PDB:1S50, ECO:0007744|PDB:1S7Y, ECO:0007744|PDB:2I0B, ECO:0007744|PDB:2I0C | 516..518 | 0/1 (0%) | |||
Lig_chan | 562..831 | CDD:278489 | 92/278 (33%) |