Sequence 1: | NP_523485.3 | Gene: | GluRIIB / 33789 | FlyBaseID: | FBgn0020429 | Length: | 913 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001268858.2 | Gene: | Gria3 / 53623 | MGIID: | 95810 | Length: | 888 | Species: | Mus musculus |
Alignment Length: | 955 | Identity: | 259/955 - (27%) |
---|---|---|---|
Similarity: | 423/955 - (44%) | Gaps: | 155/955 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 FLVLLALAIASGANEDTLVIKIGAIFFDTEMKLADAFSAALE----EVNAINPALKLDAIKRYVT 66
Fly 67 VDDSIVLQDISCDLIGSGVAAIFGPSSKTNSDIVEVLCNMTGIPHLQFDWHPQQSNRERMNHQLT 131
Fly 132 VNVAPMELFLSAAFSDILASKTFDWKSFTIAYERSSHLIRLQHILA------WKQLHKA--GIK- 187
Fly 188 MQEFERGDDYRILWKRINNAREKFVLLDCP----SDILVDVI---NASIGYNMTGSFNHLFLTNL 245
Fly 246 ---DTHL-------SGIDGFYSRDFTVAVAAVRIRTYVPPPVHDEIDVFDNSVDTRFS------- 293
Fly 294 SLGSQLVYDSIVLFYNAL-------LEISQR--PGFYIPNFSCGRGFWQPGPRLVEQMKQITPKM 349
Fly 350 VKPPFKTQRLQINADGQREDFNLEVYNPII--DRVTHIWNKEFQLVDFEKLRENSTQALKQKRLQ 412
Fly 413 NKEDFSQKPIRYTVATRVGKPYFSWREEPEGVHYEGNERFEGYAVDLIYMLAQECKFDFNFEPVR 477
Fly 478 DNKYGSYDANTDEWDGIIRQLIDNNAQIGICDLTITQARRSVVDFTVPFMQLGISILSYKEPPPK 542
Fly 543 ADIYAFLNPYNAEVWLFVMIAMMITAFALIFTGRIDQYEWDQPVENVNRE-------MERQNIWH 600
Fly 601 LSNALWLVLGSMLNQGCDLLPRGLPMRLLTAFWWIFALLISQTYIAKLAAFITSSKIAGDIGSLH 665
Fly 666 DLVDQNKVQFGTIRGGATSVYFSESNDTDNRMAWNKMLSFKPDAFTKNNEEGVDRVKLSKGTYAF 730
Fly 731 LMETTNLQYYVQRN-CELTQIGESFGEKHYGIAVPLNADFRSNLSVGILRLSERGELFKLRNKWF 794
Fly 795 NSNESTCDSNVPTIDDGQFD------MDSVGGLFVVLIVGVVVGLVIGVAEFLWHVQRISVKEKI 853
Fly 854 -------PPMLALKAEFYFVIRFWLTRKPLHTYRQSRDSTSTGYS 891 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIB | NP_523485.3 | PBP1_iGluR_Kainate | 26..393 | CDD:107377 | 87/414 (21%) |
ANF_receptor | 41..378 | CDD:279440 | 81/382 (21%) | ||
PBP2_iGluR_Kainate | 422..795 | CDD:270432 | 140/380 (37%) | ||
Lig_chan | 555..822 | CDD:278489 | 95/280 (34%) | ||
Gria3 | NP_001268858.2 | PBP1_iGluR_AMPA_GluR3 | 29..403 | CDD:380610 | 88/417 (21%) |
PBP2_iGluR_AMPA | 416..799 | CDD:270433 | 141/399 (35%) | ||
Glutamate binding | 502..504 | 0/1 (0%) |