Sequence 1: | NP_523485.3 | Gene: | GluRIIB / 33789 | FlyBaseID: | FBgn0020429 | Length: | 913 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_113796.1 | Gene: | Gria1 / 50592 | RGDID: | 621531 | Length: | 907 | Species: | Rattus norvegicus |
Alignment Length: | 868 | Identity: | 245/868 - (28%) |
---|---|---|---|
Similarity: | 408/868 - (47%) | Gaps: | 92/868 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 IKIGAIFFDTEMKLADAFSAALEEVNAINPALKLDAIKRYVTVDDSIVLQDISCDLIGSGVAAIF 89
Fly 90 GPSSKTNSDIVEVLCNMTGIPHLQF---DWHPQQSNRERMNHQLTVNVAPMELFLSAAFSDILAS 151
Fly 152 KTFDWKSFTIAYERSSHLIRLQHIL---AWKQLHKAGIK-MQEFERGDDYRILWKRINNAREKFV 212
Fly 213 LLDCPSDILVDVINASIGYNMTGSFNHLFLTNL---DTHL-------SGIDGFYSRDFTVAVAAV 267
Fly 268 RIRTYVPPPVHDEIDVFDNSVDTRFSSLGSQLVYDSIVLFYNAL-------LEISQR--PGFYIP 323
Fly 324 NFSCGRGFWQPGPRLVEQMKQITPKMVKPPFK--TQRLQINADGQREDFNLEVYNPIIDRVTHI- 385
Fly 386 -WNKEFQLV----DFEKLRENSTQALKQKRLQNKEDFSQKPIRYTVATRVGKPYFSWREEPEGVH 445
Fly 446 YEGNERFEGYAVDLIYMLAQECKFDFNFEPVRDNKYGSYDANTDEWDGIIRQLIDNNAQIGICDL 510
Fly 511 TITQARRSVVDFTVPFMQLGISILSYKEPPPKADIYAFLNPYNAEVWLFVMIAMMITAFALIFTG 575
Fly 576 RIDQYEWDQPVENVNREM---ERQNIWHLSNALWLVLGSMLNQGCDLLPRGLPMRLLTAFWWIFA 637
Fly 638 LLISQTYIAKLAAFITSSKIAGDIGSLHDLVDQNKVQFGTIRGGATSVYFSESNDTDNRMAWNKM 702
Fly 703 LSFKPDAFTKNNEEGVDRVKLSKGTYAFLMETTNLQYYVQRN-CELTQIGESFGEKHYGIAVPLN 766
Fly 767 ADFRSNLSVGILRLSERGELFKLRNKWFNSNESTCDSNVPTIDD--GQFDMDSVGGLFVVLIVGV 829
Fly 830 VVGLVIGVAEFLWHVQRISVKEK 852 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIB | NP_523485.3 | PBP1_iGluR_Kainate | 26..393 | CDD:107377 | 91/396 (23%) |
ANF_receptor | 41..378 | CDD:279440 | 84/364 (23%) | ||
PBP2_iGluR_Kainate | 422..795 | CDD:270432 | 134/376 (36%) | ||
Lig_chan | 555..822 | CDD:278489 | 91/272 (33%) | ||
Gria1 | NP_113796.1 | PBP1_iGluR_AMPA_GluR1 | 26..392 | CDD:380613 | 92/399 (23%) |
PBP2_iGluR_AMPA_GluR1 | 406..787 | CDD:270447 | 135/391 (35%) | ||
Glutamate binding. /evidence=ECO:0000250 | 492..494 | 0/1 (0%) |