DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRIIB and Ir85a

DIOPT Version :9

Sequence 1:NP_523485.3 Gene:GluRIIB / 33789 FlyBaseID:FBgn0020429 Length:913 Species:Drosophila melanogaster
Sequence 2:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster


Alignment Length:539 Identity:91/539 - (16%)
Similarity:180/539 - (33%) Gaps:146/539 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 DGQREDFNLEVYNPIIDRVTHIWNKEFQLVDFEKLRENSTQALKQKRLQNKEDFSQKPIRYTVAT 428
            ||:   .|...|||.:|.         .|:..:. :.|....|:|...:...:..:||:|..:..
  Fly   161 DGR---LNAYRYNPFMDN---------YLIPVDN-KPNEVPTLEQLFPKTIPNMQRKPLRMCIYK 212

  Fly   429 RVGKPYFSWREEPEGVHYEGNERFEGYAVDLIYMLAQECKFDFNFEPVRDNKYGSYDANTDEWDG 493
            ...:..| ||   :|.....:.....|..:         :.:......|.:.|.:::.::|    
  Fly   213 DDVRAIF-WR---QGTILGTDGLLAAYVAE---------RLNATMMITRPHSYNNHNLSSD---- 260

  Fly   494 IIRQLIDNNAQIGICDLTITQARRSV---VDFTVP--FMQLGISILSYKEPP-----PKA----D 544
                         ||.|.:.:....|   :.|.||  |.:...|.:|:....     |||    .
  Fly   261 -------------ICFLEVAKEYVDVAMNIRFLVPDTFRKQAESTVSHTRDDLCVIVPKAKTAPT 312

  Fly   545 IYAFLNPYNAEVWLFVMIAMMI-TAFALIF---TGRIDQYEWDQPVENVNREMERQNIWHLSNAL 605
            .:.....:.:.||..::::::: ..|..|.   .||:       |::                  
  Fly   313 FWNIFRSFGSLVWALILVSVLVANVFCYILKSEVGRV-------PMQ------------------ 352

  Fly   606 WLVLGSMLNQGCDLLPRGLPMRLLTAFWWIFALLISQTYIAKLAAFITSSKIAGDIGSL------ 664
              :....|......:|....:||...||..|.|||...:...|.:.:.......||..|      
  Fly   353 --LFAGALTMPMTQIPPNHSIRLFLIFWLYFGLLICSAFKGNLTSMMVFQPYLPDINQLGALARS 415

  Fly   665 --HDLV-----------------DQNKVQFGTIRGGATSVYFSESNDTDNRMAWNKMLSFKPDAF 710
              |.::                 .:::::...:....|.:|....|: |.|.|:  :..:....|
  Fly   416 HYHIIIRPRHVKHIQHFLTLGHKHESRIREQMLEVSDTQMYEMMRNN-DIRFAY--LEKYHIARF 477

  Fly   711 TKNNEEGVDRVKLSKGTYAF-LMETTNLQY---YVQRNCELTQIGESFGEKHYGIAVPLNADFRS 771
            ..|:     ||.:..|...| ||.:..:.:   |:          ..:|..:.|.   |::..||
  Fly   478 QVNS-----RVHMHLGRPLFHLMNSCLVPFHAVYI----------VPYGSPYLGF---LDSLIRS 524

  Fly   772 NLSVGILRLSER---GELFKLRNKWFNSNESTCDSNVPTIDDGQFDMDSVGGLFVVLIVGVVVGL 833
            :...|..|..:|   ....|...|..|....: .::.|.:    ..:.....:|.:.:||:.:..
  Fly   525 SHEFGFERYWDRIMNSAFIKSGVKVVNRRRGS-GNDEPVV----LKLQHFHAVFALWLVGIGMAC 584

  Fly   834 VIGVAEFLWHVQRISVKEK 852
            ::...|.|.|...::|.::
  Fly   585 IVLAWEHLTHNYNLAVTKR 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRIIBNP_523485.3 PBP1_iGluR_Kainate 26..393 CDD:107377 7/28 (25%)
ANF_receptor 41..378 CDD:279440 5/13 (38%)
PBP2_iGluR_Kainate 422..795 CDD:270432 69/422 (16%)
Lig_chan 555..822 CDD:278489 49/302 (16%)
Ir85aNP_649833.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462635
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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