DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRIIB and Ir75a

DIOPT Version :9

Sequence 1:NP_523485.3 Gene:GluRIIB / 33789 FlyBaseID:FBgn0020429 Length:913 Species:Drosophila melanogaster
Sequence 2:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster


Alignment Length:526 Identity:111/526 - (21%)
Similarity:204/526 - (38%) Gaps:115/526 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 QINADGQREDFNLEVYNPIIDRVT-HIWNKEFQLVDFEKLRENSTQALKQKRLQNKEDFSQKPIR 423
            |:|..|..|    ...:|.:.|.| |:               :|.|  |:.:..|:|..:...:|
  Fly   164 QLNVTGSHE----MSCDPFVCRRTRHL---------------SSLQ--KRSKYGNREQLTDVVLR 207

  Fly   424 Y-TVATRVGKP-------YFSWREEPEGVHYEGNERFEGYAVDLIYMLAQECKFDFNFEPVRDNK 480
            . ||.|:  :|       ...:..:....|.:...|| |:.:.||......||..|.|       
  Fly   208 VATVVTQ--RPLTLSDDELIRFLSQENDTHIDSLARF-GFHLTLILRDLLHCKMKFIF------- 262

  Fly   481 YGSYDANTDEWD------GIIRQLIDNNAQIGICDLTITQ--ARRSVVDFTVPFMQLGI--SILS 535
                   :|.|.      |.:..::|..|     |||.|.  |....:.:....::.|.  |:..
  Fly   263 -------SDSWSKSDVVGGSVGAVVDQTA-----DLTATPSLATEGRLKYLSAIIETGFFRSVCI 315

  Fly   536 YKEPPP---KADIYAFLNPYNAEVW-LFVMIAMMITAFALIFTGRIDQYEWDQPVENVNREMERQ 596
            ::.|..   :.|:  ||.|::..|| ||..:..:|....           |........|..:|.
  Fly   316 FRTPHNAGLRGDV--FLQPFSPLVWYLFGGVLSLIGVLL-----------WITFYMECKRMQKRW 367

  Fly   597 NIWHLSNALWLVL---GSMLNQGCDLLPRGLPMRLLTAFWWIFALLISQTYIAKLAAFITSSKIA 658
            .:.:|.:.|...|   |:...|...|:||....||:....::.:.::...|.:.:.:.:.||.:.
  Fly   368 RLDYLPSLLSTFLISFGAACIQSSSLIPRSAGGRLIYFALFLISFIMYNYYTSVVVSSLLSSPVK 432

  Fly   659 GDIGSLHDLVDQNKVQFGTIRGGATSVYFSESNDTDNRM-AWNKMLSFKPDAFTKN------NEE 716
            ..|.::..|.:      .::..|...:.|::|....:|: ..:..:..|.::.|:|      .|:
  Fly   433 SKIKTMRQLAE------SSLTVGLEPLPFTKSYLNYSRLPEIHLFIKRKIESQTQNPELWLPAEQ 491

  Fly   717 GVDRVKLSKGTYAFLMETTNLQYYVQRN------CELTQI---GESFGEKHYGIAVPLNADFRSN 772
            ||.||:.:.| |.::.||::...||:|.      |:|.::   .|.....|    :..|:.::..
  Fly   492 GVLRVRDNPG-YVYVFETSSGYAYVERYFTAQEICDLNEVLFRPEQLFYTH----LHRNSTYKEL 551

  Fly   773 LSVGILRLSERGELFKLRNKWFNSNESTCDSN-VPTIDDGQFDMDSVGGLFVVLIVGVVVGLVIG 836
            ..:..||:.|.|...|.|:.|.:........| |.|:     .|:.|..|.::||...::.:||.
  Fly   552 FRLRFLRILETGVYRKQRSYWVHMKLHCVAQNFVITV-----GMEYVAPLLLMLICADILVVVIL 611

  Fly   837 VAEFLW 842
            :.|..|
  Fly   612 LVELAW 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRIIBNP_523485.3 PBP1_iGluR_Kainate 26..393 CDD:107377 8/33 (24%)
ANF_receptor 41..378 CDD:279440 4/17 (24%)
PBP2_iGluR_Kainate 422..795 CDD:270432 86/413 (21%)
Lig_chan 555..822 CDD:278489 59/287 (21%)
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 62/292 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462582
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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