Sequence 1: | NP_523485.3 | Gene: | GluRIIB / 33789 | FlyBaseID: | FBgn0020429 | Length: | 913 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001106655.1 | Gene: | Gria4 / 29629 | RGDID: | 61863 | Length: | 902 | Species: | Rattus norvegicus |
Alignment Length: | 885 | Identity: | 236/885 - (26%) |
---|---|---|---|
Similarity: | 405/885 - (45%) | Gaps: | 120/885 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 IASGANEDTLVIKIGAIFFDTEMKLADAFSAAL----EEVNAINPALKLDAIKRYVTVDDSIVLQ 74
Fly 75 DISCDLIGSGVAAIFGPSSKTNSDIVEVLCNMTGIPHLQFDWHPQQSNRERMNHQLTVNVAPMEL 139
Fly 140 FLSAAFSDILASKTFDWKSFTIAYERSSHLIRLQHIL------AWKQLHKAGIKMQEFERGDDYR 198
Fly 199 ILWKRINNAREKFVLLDCPSDILVDVIN--ASIGYNMTGSFNHLFLTNL---DTHL-------SG 251
Fly 252 IDGFYSRDFTVAVAAVRI--------RTY----VPPPVHDEIDVFDNSVDTRFSSLGSQLVYDSI 304
Fly 305 VLF---YNAL----LEISQR--PGFYIPNFSCGRGFWQPGPRLVEQMKQITPKMVKPPFKTQRLQ 360
Fly 361 INADGQREDFNLEVY-----NPIIDRVTHIWNKEFQLVDFEKLRE--NSTQALKQKRLQNKEDFS 418
Fly 419 QKPIRYTVATRVGKPYFSWREEPEGVHYEGNERFEGYAVDLIYMLAQECKFDFNFEPVRDNKYGS 483
Fly 484 YDANTDEWDGIIRQLIDNNAQIGICDLTITQARRSVVDFTVPFMQLGISILSYKEPPPKADIYAF 548
Fly 549 LNPYNAEVWLFVMIAMMITAFALIFTGRIDQYEW--DQPVENVNREMER-QNIWHLSNALWLVLG 610
Fly 611 SMLNQGCDLLPRGLPMRLLTAFWWIFALLISQTYIAKLAAFITSSKIAGDIGSLHDLVDQNKVQF 675
Fly 676 GTIRGGATSVYFSESNDTDNRMAWNKMLSFKPDAFTKNNEEGVDRVKLSKGTYAFLMETTNLQYY 740
Fly 741 VQRN-CELTQIGESFGEKHYGIAVPLNADFRSNLSVGILRLSERGELFKLRNKWFNSNESTCDSN 804
Fly 805 VPTIDD--GQFDMDSVGGLFVVLIVGVVVGLVIGVAEFLW 842 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIB | NP_523485.3 | PBP1_iGluR_Kainate | 26..393 | CDD:107377 | 82/414 (20%) |
ANF_receptor | 41..378 | CDD:279440 | 75/384 (20%) | ||
PBP2_iGluR_Kainate | 422..795 | CDD:270432 | 136/376 (36%) | ||
Lig_chan | 555..822 | CDD:278489 | 91/272 (33%) | ||
Gria4 | NP_001106655.1 | PBP1_iGluR_AMPA_GluR4 | 28..398 | CDD:107383 | 83/415 (20%) |
ANF_receptor | 39..380 | CDD:279440 | 75/383 (20%) | ||
PBP2_iGluR_AMPA_GluR4 | 414..795 | CDD:270445 | 136/396 (34%) | ||
Lig_chan | 546..825 | CDD:278489 | 93/279 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166349728 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.840 |