Sequence 1: | NP_523485.3 | Gene: | GluRIIB / 33789 | FlyBaseID: | FBgn0020429 | Length: | 913 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036707.3 | Gene: | Grin2c / 24411 | RGDID: | 2739 | Length: | 1250 | Species: | Rattus norvegicus |
Alignment Length: | 966 | Identity: | 201/966 - (20%) |
---|---|---|---|
Similarity: | 365/966 - (37%) | Gaps: | 237/966 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 IASGANEDTLVIKIGAIFFDTEMKLADAFSAALEEVNAINPALKLDAIKRYV-TVDDSIVLQDIS 77
Fly 78 CDLIGSGVAAIFGPSSKTNSD------IVEVLCNMTGIPHLQFD------WHPQQSNRERMNHQL 130
Fly 131 TVNVAPMELFLSAAFSDILASKTFDWKSFTIAYE-RSSHLIRLQHI--------LAWKQLHKAGI 186
Fly 187 KM---------QEFERGDDYRILWKRINNAREKFVLLDCPSDILVD------VINASIGYN---- 232
Fly 233 ----------MTGSFNHLFLTNLDTHLSGIDGFYSRDFTVAVAAVRIRTY------VPPPVHDEI 281
Fly 282 DVFDNSVDTRFSSLGSQLVYDSIVLFYNALLEISQRPGFYIPNFSCGRGF-WQPGPRLVEQMKQI 345
Fly 346 TPKMVKPPFKTQRLQINADGQREDFNLEVYNPIIDRVTH--------IWNKEFQLVDFEKLRENS 402
Fly 403 TQALKQKRLQNKEDFSQKPIRYTVATRVGKPYFSWREEPEGV----------HYEGNERF----- 452
Fly 453 --------EGYAVDLIYMLAQECKFDFNFEPVRDNKYGSYDANTDEWDGIIRQLIDNNAQIGICD 509
Fly 510 LTITQARRSVVDFTVPFMQLGISIL---SYKEPPPKADIYAFLNPYNAEVWLFVMIAMMITAFAL 571
Fly 572 IFTGRIDQYEWDQPVENVNREMERQN-----IWHLSNALWLVLGSMLNQGCDL-LPRGLPMRLLT 630
Fly 631 AFWWIFALLISQTYIAKLAAFITSSKIAGDIGSLHDLVDQN------KVQFGTIRGGATSVYFSE 689
Fly 690 SNDTDN-RMAWNKMLSFKPDAFTKNNEEGVDRVKLSKGTYAFLMETTNLQYYVQRN--CELTQIG 751
Fly 752 ES--FGEKHYGIAVPLNADFRSNLSVGILRLSERGELFKLRNKWFNSNESTCDSNVPTIDDGQFD 814
Fly 815 MDSVGGLFVVLIVGVVVGLVIGVAEFLW-HVQRISVKEKIPPMLALKAEFYFVIRF 869 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIB | NP_523485.3 | PBP1_iGluR_Kainate | 26..393 | CDD:107377 | 79/432 (18%) |
ANF_receptor | 41..378 | CDD:279440 | 73/394 (19%) | ||
PBP2_iGluR_Kainate | 422..795 | CDD:270432 | 103/415 (25%) | ||
Lig_chan | 555..822 | CDD:278489 | 66/283 (23%) | ||
Grin2c | NP_036707.3 | PBP1_iGluR_NMDA_NR2 | 41..397 | CDD:380601 | 78/427 (18%) |
PBP2_iGluR_NMDA_Nr2 | 413..813 | CDD:270436 | 105/436 (24%) | ||
NMDAR2_C | 850..>925 | CDD:402274 | 4/27 (15%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166349740 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.830 |