Sequence 1: | NP_523485.3 | Gene: | GluRIIB / 33789 | FlyBaseID: | FBgn0020429 | Length: | 913 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001355384.1 | Gene: | ZK867.2 / 191445 | WormBaseID: | WBGene00022829 | Length: | 354 | Species: | Caenorhabditis elegans |
Alignment Length: | 198 | Identity: | 43/198 - (21%) |
---|---|---|---|
Similarity: | 72/198 - (36%) | Gaps: | 58/198 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 449 NERFEGYAVDLIYMLAQECKFDFNFEPVRDNKYG-SYDANTDE----WDGIIRQL-IDNNAQIGI 507
Fly 508 CDLTITQARRSVVDFTVPFMQLGISILSYKEPPP---------------------KADIYAFLN- 550
Fly 551 ------PYNAEVWLFVMI---AMMITAF-----------ALIFTGRIDQYEWDQPVENVNREMER 595
Fly 596 QNI 598 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIB | NP_523485.3 | PBP1_iGluR_Kainate | 26..393 | CDD:107377 | |
ANF_receptor | 41..378 | CDD:279440 | |||
PBP2_iGluR_Kainate | 422..795 | CDD:270432 | 43/198 (22%) | ||
Lig_chan | 555..822 | CDD:278489 | 12/58 (21%) | ||
ZK867.2 | NP_001355384.1 | Lig_chan-Glu_bd | 22..77 | CDD:214911 | 12/54 (22%) |
Periplasmic_Binding_Protein_Type_2 | <69..>103 | CDD:389745 | 12/34 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |