Protein Alignment GluRIIB and C08B6.5

DIOPT Version :9

• Sequence 1: NP_523485.3
• Gene: GluRIIB / 33789
• FlyBaseID: FBgn0020429
• Length: 913
• Species: Drosophila melanogaster
• Sequence 2: NP_505601.1
• Gene: C08B6.5 / 182390
• WormBaseID: WBGene00007426
• Length: 423
• Species: Caenorhabditis elegans
• Alignment Length: 442
• Identity: 88/442 - (19%)
• Similarity: 163/442 - (36%)
• Gaps: 92/442 - (20%)

  Fly   454 GYAVDLIYMLAQECKFDF-------NFEPVRDNKYGSYDANTDEWDGIIRQLIDNNAQIGICDLT 511
            |..:::|.|:.|...:.:       .|..|.|......|.|   :.||:..|..:...:....:.
 Worm    10 GAEIEIISMVMQILDWQWEVIDTEKEFNVVNDFGNPQPDGN---FSGIMGLLAQDKIDMSGLSMR 71

  Fly   512 ITQARRSVVDFTVP---FMQLGISILSYKEPPPKADIYAFL-NPYNAEVWLFVMIAMMITAFALI 572
            ||.||.....||.|   |.|:.|.     :.|.:.|...|: .|:..::|| :::|.::.|..:.
 Worm    72 ITPARMEFAHFTFPIRYFQQVYII-----KRPAENDFRNFVFAPFTTDMWL-LLLATIMGASTMR 130

  Fly   573 FTGRIDQYEWDQPVENVNREMERQNIWHLSNALWLVLGSMLNQGCDLLPRGLPMRLLTAFWWIFA 637
            |...:   .||      :|...:.||:  ::::....|.||.|... .|..:...||..|..:..
 Worm   131 FACAL---YWD------SRVGSKFNIY--TSSVLETFGLMLKQRVQ-DPTAVSTMLLEGFLIVAM 183

  Fly   638 LLISQTYIAKLAAFIT---SSKIAGDIGSLHDLVDQNK-VQFGTIRGGATSVYFS---ESNDTDN 695
            :.|:|.|...:.:.:|   ||:|.    .||    ||: ::....:....:.||:   |.:...|
 Worm   184 MSIAQYYQTSMNSRLTAPPSSRIP----FLH----QNQLIELLLDKETYLTYYFNLTLEGSTEKN 240

  Fly   696 RMAWNKMLSFKPDAFTKNNEEGVDRVK-LSKGTYAFLMETTNLQYYVQRNCELTQIGESFGEKHY 759
            .....:.|:..|.......   .|.:| :.||..          :|...:.|......|..:|..
 Worm   241 EYNIKRALAMNPIVVRARE---ADLIKEIQKGGV----------FYSTYDIEFLPQAVSVWDKRQ 292

  Fly   760 GIAVPLNADFRSNLSVGIL-------RLSERGELFKLRNK----------------WFNSNESTC 801
            |:.|..:..       |||       .:|.| :|.::.||                .:.:.:...
 Worm   293 GLTVIRDTS-------GILSYVAFGFSISNR-KLCQMFNKALLKILPGIASITLGPGYGTKKQPE 349

  Fly   802 DSNVPTIDDGQFDMDSVGGLFVVLIVGVVVGLVIGVAEFLWHVQRISVKEKI 853
            |..|............:..||.:.::|..:.|...:.|.::...|:..::|:
 Worm   350 DITVQVKKTRLSLKKHLEQLFYIYLIGCGIALAFFIIEKVFFRMRVLKRQKV 401

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GluRIIB	NP_523485.3	PBP1_iGluR_Kainate	26..393	CDD:107377
		ANF_receptor	41..378	CDD:279440
		PBP2_iGluR_Kainate	422..795	CDD:270432	79/382 (21%)
		Lig_chan	555..822	CDD:278489	55/297 (19%)
C08B6.5	NP_505601.1	Periplasmic_Binding_Protein_Type_2	13..>116	CDD:304360	25/110 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1052
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900