Sequence 1: | NP_523485.3 | Gene: | GluRIIB / 33789 | FlyBaseID: | FBgn0020429 | Length: | 913 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005170953.1 | Gene: | gria2a / 170450 | ZFINID: | ZDB-GENE-020125-3 | Length: | 893 | Species: | Danio rerio |
Alignment Length: | 935 | Identity: | 246/935 - (26%) |
---|---|---|---|
Similarity: | 402/935 - (42%) | Gaps: | 201/935 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MHGLQFLVLLALAIAS------------GANEDTLVIKIGAIFFDT-EMKLADAFSAALEEVNAI 52
Fly 53 NPALKLDAIKRYVTVDDSIVLQDISCDLIGSGVAAIFGPSSKTNSDIVEVLCNMTGIPHLQFDWH 117
Fly 118 PQQSNRERMNHQLTVNVAPMELFLSAAFSDI---LAS--KTFDWKSFTIAYERSSHLIRLQHIL- 176
Fly 177 --AWKQLHKAGIKMQEFE---RGDDYRILWKRINNAREKFVLLDCPSDILVDVIN--ASIGYNMT 234
Fly 235 GSFNHLFLTN---LDTHLS-------GIDGFYSRDFTVAVAAVRIRTYVPPPVHDEIDVFDNSVD 289
Fly 290 TRFSSL--------------GSQLVYDSIVLFYNAL-------LEISQR---------PGFYIPN 324
Fly 325 FSCGRGFWQPGPRLVEQMKQITPKMVKPPFKTQRLQINADGQREDFNLEVY-----NPIIDRVTH 384
Fly 385 IWNK-EFQLVDFEKLRENSTQALKQKRLQNKEDFSQKPIRYTVATRVGKPYFSWREEPEGVHYEG 448
Fly 449 NERFEGYAVDLIYMLAQECKFDFNFEPVRDNKYGSYDANTDEWDGIIRQLIDNNAQIGICDLTIT 513
Fly 514 QARRSVVDFTVPFMQLGISILSYKEPPPKADIYAFLNPYNAEVWLFVMIAMMITAFALIFTGRID 578
Fly 579 QYEWDQ---------PVENVNREMERQNIWHLSNALWLVLGSMLNQGCDLLPRGLPMRLLTAFWW 634
Fly 635 IFALLISQTYIAKLAAFITSSKIAGDIGSLHDLVDQNKVQFGTIRGGATSVYFSESNDTDNRMAW 699
Fly 700 NKMLSFKPDAFTKNNEEGVDRVKLSKGTYAFLMETTNLQYYVQRN-CELTQIGESFGEKHYGIAV 763
Fly 764 PLNADFRSNLSVGILRLSERGELFKLRNKWF-----------NSNESTCDSNVPTIDDGQFDMDS 817
Fly 818 VGGLFVVLIVGVVVGLVIGVAEFLW 842 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIB | NP_523485.3 | PBP1_iGluR_Kainate | 26..393 | CDD:107377 | 84/426 (20%) |
ANF_receptor | 41..378 | CDD:279440 | 75/394 (19%) | ||
PBP2_iGluR_Kainate | 422..795 | CDD:270432 | 140/393 (36%) | ||
Lig_chan | 555..822 | CDD:278489 | 94/287 (33%) | ||
gria2a | XP_005170953.1 | Periplasmic_Binding_Protein_Type_1 | 23..391 | CDD:299141 | 86/443 (19%) |
ANF_receptor | 51..373 | CDD:279440 | 76/394 (19%) | ||
PBP2_iGluR_AMPA | 406..783 | CDD:270433 | 141/398 (35%) | ||
Lig_chan | 538..816 | CDD:278489 | 96/294 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170591074 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.840 |