Sequence 1: | NP_523485.3 | Gene: | GluRIIB / 33789 | FlyBaseID: | FBgn0020429 | Length: | 913 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017952374.2 | Gene: | grin3b / 100497172 | XenbaseID: | XB-GENE-990106 | Length: | 1005 | Species: | Xenopus tropicalis |
Alignment Length: | 907 | Identity: | 201/907 - (22%) |
---|---|---|---|
Similarity: | 333/907 - (36%) | Gaps: | 224/907 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 80 LIGSGVAAIFG-PSSKTNSDIVEVLCNMTGIP-------------------HLQFDWHPQQSNRE 124
Fly 125 RMNHQLTVNVAPMELFLS----AAFSDILASKTFDWKSFTIAYERSS------------HLIRLQ 173
Fly 174 HILAWKQLHKAGIKMQEFER---GDDYR---ILWKRINNAREKFVLLDCPSDILVDVINASIGYN 232
Fly 233 MTG-------------SFNHLFLTNLDTHLSGIDGFYSRDFTVAVAAVRIRTYVPPP---VHDEI 281
Fly 282 DVFDNS---------------VDTRFSSLGSQLVYDSIVLFYNALLEISQ--------RPGFYIP 323
Fly 324 NFSCGRGF------------------WQPGPRLVEQMKQITPKMVKPPFKTQRLQINADGQREDF 370
Fly 371 NLEVYNPIIDRVTHIWNKEFQLVDFEKLRENSTQALKQKRLQNKEDFSQKPIRYTVATRVGKPYF 435
Fly 436 SWREEPEGVHYEGNERFEGYAVDLIYMLAQECKFDFNFEPVRDNKYGSYDANTDEWDGIIRQLID 500
Fly 501 NNAQIGICDLTITQARRSVVDFTVPFMQLGISILSYKEPPPKADIYAFLNPYNAEVWLFVMIAMM 565
Fly 566 ITAFALIFTGRIDQYEWDQPVENVNREMERQNIWHLSNALWLVLGSMLNQG-CDLLPRGLPMRLL 629
Fly 630 TAFWWIFALLISQTYIAKLAAFITSSKIAGDIGSLHDLVDQNKVQ---FGTIRGGATSVYFSESN 691
Fly 692 DTDNRMAWNKMLSFKPDAFTKNNEEGVDRVKLSKGTY-AFLMETTNLQYYV--QRNCELTQIGES 753
Fly 754 FGEKHYGIAVPLNADFRSNLSVGILRLSERGELFKLRNKWFNSNESTCDSNVPTIDDG-QFDMDS 817
Fly 818 VGGLFVVLIVGVVVGLVIGVAE-FLWHVQRISVKEKIPPMLALKAEFYFVIRFWL-TRKPLH 877 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIB | NP_523485.3 | PBP1_iGluR_Kainate | 26..393 | CDD:107377 | 69/411 (17%) |
ANF_receptor | 41..378 | CDD:279440 | 66/396 (17%) | ||
PBP2_iGluR_Kainate | 422..795 | CDD:270432 | 106/379 (28%) | ||
Lig_chan | 555..822 | CDD:278489 | 76/274 (28%) | ||
grin3b | XP_017952374.2 | PBP1_iGluR_NMDA_NR3 | 29..402 | CDD:380600 | 55/343 (16%) |
PBP2_iGluR_NMDA_Nr3 | 418..814 | CDD:270438 | 123/459 (27%) | ||
Lig_chan | 582..848 | CDD:395014 | 80/281 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |