Protein Alignment GluRIIA and Ir68b

DIOPT Version :9

• Sequence 1: NP_523484.2
• Gene: GluRIIA / 33788
• FlyBaseID: FBgn0004620
• Length: 907
• Species: Drosophila melanogaster
• Sequence 2: NP_648548.1
• Gene: Ir68b / 39378
• FlyBaseID: FBgn0036250
• Length: 635
• Species: Drosophila melanogaster
• Alignment Length: 599
• Identity: 102/599 - (17%)
• Similarity: 205/599 - (34%)
• Gaps: 133/599 - (22%)

  Fly   355 KTISEDDVEPHFKTENMKL---------DEYGQRIHFNLEIYKP-----TVNEPMMVWTPDNG-- 403
            :.:...::||..:|:::.:         |...:||   |::..|     .:::.:.|| |:.|
  Fly    71 RNMEAHELEPFRRTDSLSIFQIPAAEKGDSLVRRI---LDMLNPHQRRKHMHKYLFVW-PNAGRH 131

  Fly   404 ----------IKKRLLNLELES-AGTTQDFSE------------------QRKVYTV------VT 433
                      .||.|..|.:.. ...|.||..                  .|||..:      .:
  Fly   132 QLLRLFRGSWAKKLLYGLAITGRENGTFDFDPFAWGGLQVIQRLDGEVPYARKVKDLRGYPLRFS 196

  Fly   434 HYEEPYFMMKEDHENFRGREKYEGYAVDLISKLSELMEFDYEFMIVNGNGKYNP--ETKQWDGII 496
            .:.:|...|........|.:..:|.|..::   .|::.....::....|..|..  ....:.|::
  Fly   197 MFTDPLMAMPRSPVETAGYQAVDGVAARVV---GEMLNASVTYVFPEDNESYGRCLPNGNYTGVV 258

  Fly   497 RKLIDHHAQIGVCDLTITQMRRSVVDFTVPFMQLGISILHYKSPPEPKNQFAFLEPFAVEVWIYM 561
            ..::..|.........:.......|:...|:.:..:.::...|..:|: ...|:..|...||..:
  Fly   259 SDIVGGHTHFAPNSRFVLDCIWPAVEVLYPYTRRNLHLVVPASAIQPE-YLIFVRVFRRTVWYLL 322

  Fly   562 IFAQLIMTLAFVFIARLSYREWLPPNPAIQDPDELENIWNVNNSTWLMVGSIMQQGCDILPRG-- 624
            :...|::.|.|..:.||..|  :|....||           ..:||..:..:..:.....|.|
  Fly   323 LVTLLVVVLVFWVMQRLQRR--IPRRGVIQ-----------FQATWYEILEMFGKTHVGEPAGRL 374

  Fly   625 ---PHMRILTGMWWFFALMMLSTYTANLAAFLTSNKWQSSIKSLQDLIEQDKVHFGSMRGGSTSL 686
               ..||.....|..|:.::.:.|.|.|.:......::..:..:.||:..| ||..::    |::
  Fly   375 SSFSSMRTFLMGWILFSYVLSTIYFAKLESGFVRPSYEEQVDRVDDLVHLD-VHIYAV----TTM 434

  Fly   687 F---FSESNDTDYQRAWNQMKDFNPSAFTSTNKEGVARVRKEKGGYAFLM------ETTSLTYNI 742
            :   .|...:..|....|:.:.. |....::..:.|.|.|..:.  ||:|      :..::||:.
  Fly   435 YDAVRSALTEHQYGLLENRSRQL-PLGIATSYYQPVVRRRDRRA--AFIMRDFHARDFLAITYDS 496

  Fly   743 ERNCDLTQIG-EQIGEKHYGLAVPLGSDYRTNLSVSILQLSERGELQKMKNKWWKNHNV------ 800
            :.......|. |.:........:|.||.:...|........|.|..:.     |:..::
  Fly   497 QAERPAYHIAREYLRSMICTYILPRGSPFLHRLESLYSGFLEHGFFEH-----WRQMDLITRVGA 556

  Fly   801 --TCDSYHEVDGDE------------------LSIIELGGVFLVLAGGV---LIGVILGIFEFLW 842
              ..:.:.|..||:                  |::..|.|.|.:.:.|:   .:|..:....:.|
  Fly   557 SPDAEEFLEDLGDQTDTDSGSNELAIRNKKVVLTLDILQGAFYLWSVGIGISCLGFAVEHAHWFW 621

  Fly   843 NVQNV--AVEERVT 854
            ..|.:  |||.|.:
  Fly   622 RRQTLRNAVEARTS 635

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GluRIIA	NP_523484.2	PBP1_iGluR_Kainate	33..404	CDD:107377	12/74 (16%)
		ANF_receptor	46..386	CDD:279440	7/39 (18%)
		PBP2_iGluR_Kainate	426..796	CDD:270432	67/392 (17%)
		Lig_chan	556..828	CDD:278489	56/312 (18%)
Ir68b	NP_648548.1	Lig_chan	333..607	CDD:278489	53/299 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45462699
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930