Sequence 1: | NP_523484.2 | Gene: | GluRIIA / 33788 | FlyBaseID: | FBgn0004620 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_997917.2 | Gene: | gria4b / 336069 | ZFINID: | ZDB-GENE-030131-8013 | Length: | 904 | Species: | Danio rerio |
Alignment Length: | 950 | Identity: | 303/950 - (31%) |
---|---|---|---|
Similarity: | 476/950 - (50%) | Gaps: | 113/950 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MRL-CPVVIYAFIIIIGFLEGIIALGGDDRNEITVGAIFYENEKEIELSFDQA-FREVNNMKFSE 63
Fly 64 LRFVTIKRY--MPTNDSFLLQQITCELISNGVAAIFGPSSKAASDIVAQIANATGIPHIEYDLKL 126
Fly 127 EATRQEQLNHQMSINVAPSLSVLSRAYFEIIKSNYEWRTFTLIYETPEGLARLQDLMNIQALNSD 191
Fly 192 YVKLRNLADYAD-DYRILWKETDETFHEQRIILDCEPKTLKELLK--VSIDFKLQGPFRNWFLTH 253
Fly 254 LDTHNSGLRDIYNEDFK---ANITSVRLKVVD-ANPFERK-KTRLTKVDQILGNQTMLP-----I 308
Fly 309 LIYDAVVLFASSARNV-----------IAAMQPFHPPNRHCGSSSPWMLGAFIVNEMKTISEDDV 362
Fly 363 EPHFK--TENMKLDEYGQRIHFNLEIYKPTVNEPMMV--WTPDNGIKKRLLN-----LELESAGT 418
Fly 419 TQDFSEQRKVYTVVTHYEEPYFMMKEDHENFRGREKYEGYAVDLISKLSELMEFDYEFMIVNGNG 483
Fly 484 KY---NPETKQWDGIIRKLIDHHAQIGVCDLTITQMRRSVVDFTVPFMQLGISILHYKSPPEPKN 545
Fly 546 QFAFLEPFAVEVWIYMIFAQLIMTLAFVFIARLSYREWLPPN--------PAIQDPDELENIWNV 602
Fly 603 NNSTWLMVGSIMQQGCDILPRGPHMRILTGMWWFFALMMLSTYTANLAAFLTSNKWQSSIKSLQD 667
Fly 668 LIEQDKVHFGSMRGGSTSLFFSESNDTDYQRAWNQMKDFNPSAFTSTNKEGVARVRKEKGGYAFL 732
Fly 733 METTSLTYNIERN-CDLTQIGEQIGEKHYGLAVPLGSDYRTNLSVSILQLSERGELQKMKNKWWK 796
Fly 797 NHNVTCDSYHEVDGDE----LSIIELGGVFLVLAGGVLIGVILGIFEFLWNVQNVAVEERVTPWQ 857
Fly 858 AFKAELIFALKFWVRKKPMRISSSSDKS-----SSRRSSG 892 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIA | NP_523484.2 | PBP1_iGluR_Kainate | 33..404 | CDD:107377 | 103/401 (26%) |
ANF_receptor | 46..386 | CDD:279440 | 96/368 (26%) | ||
PBP2_iGluR_Kainate | 426..796 | CDD:270432 | 163/381 (43%) | ||
Lig_chan | 556..828 | CDD:278489 | 114/284 (40%) | ||
gria4b | NP_997917.2 | Periplasmic_Binding_Protein_Type_1 | 28..398 | CDD:324556 | 104/406 (26%) |
PBP2_iGluR_AMPA_GluR4 | 414..793 | CDD:270445 | 164/384 (43%) | ||
Lig_chan | 546..827 | CDD:306551 | 115/285 (40%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170591040 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100167 | |
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.740 |