Sequence 1: | NP_523484.2 | Gene: | GluRIIA / 33788 | FlyBaseID: | FBgn0004620 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001106187.1 | Gene: | Grik3 / 298521 | RGDID: | 71027 | Length: | 919 | Species: | Rattus norvegicus |
Alignment Length: | 923 | Identity: | 284/923 - (30%) |
---|---|---|---|
Similarity: | 473/923 - (51%) | Gaps: | 92/923 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 32 ITVGAIF-YEN--EKEIELSFDQAFR---EVNNMKFSELRFVTIK---RYMPTNDSFLLQQITCE 87
Fly 88 LISNGVAAIFGPSSKAASDIVAQIANATGIPHIEYDLKLEATRQEQLNHQMS------INVAPSL 146
Fly 147 SVLSRAYFEIIKSNYEWRTFTLIYETPEGLARLQDLMNIQALNSDYVKLRNLADYADDYRILWKE 211
Fly 212 TDETFHEQRIILDCEPKTLKELLKVSIDFKLQGPFRNWFLTHLDTHNSGLRDIYNEDFK---ANI 273
Fly 274 TSVRLKVVDANP----------FERKKTRLTKVDQILGNQTML-PILIYDAV----VLFASSARN 323
Fly 324 VIAAMQPFHPPNRHCGSSSPWMLGAFIVNEMKTISEDDVEPHF---KTENMKLDEYGQRIHFNLE 385
Fly 386 I--YKPTVNEPMMVWTPDNGIKKRLLNLELESAGTTQDFSEQ--RKVYTVVTHYEEPYFMMKEDH 446
Fly 447 ENFRGREKYEGYAVDLISKLSELMEFDYEFMIVNGNGKYNPETK--QWDGIIRKLIDHHAQIGVC 509
Fly 510 DLTITQMRRSVVDFTVPFMQLGISILHYKSPPEPKNQFAFLEPFAVEVWIYMIFAQLIMTLAFVF 574
Fly 575 IARLSYREWLPPNPAIQDPDELENIWNVNNSTWLMVGSIMQQGCDILPRGPHMRILTGMWWFFAL 639
Fly 640 MMLSTYTANLAAFLTSNKWQSSIKSLQDLIEQDKVHFGSMRGGSTSLFFSESNDTDYQRAWNQMK 704
Fly 705 DFNPSAFTSTNKEGVARVRKEKGGYAFLMETTSLTYNIERNCDLTQIGEQIGEKHYGLAVPLGSD 769
Fly 770 YRTNLSVSILQLSERGELQKMKNKWWKNHNVTCDSYHEVDGDELSIIELGGVFLVLAGGVLIGVI 834
Fly 835 LGIFEFLWNVQNVAVEERVTPWQAFKAELIFALKFWVRKK-----PMRISSSSDKSSSRRSSGSR 894
Fly 895 RSSKEKSRSKTVS 907 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIA | NP_523484.2 | PBP1_iGluR_Kainate | 33..404 | CDD:107377 | 103/408 (25%) |
ANF_receptor | 46..386 | CDD:279440 | 93/372 (25%) | ||
PBP2_iGluR_Kainate | 426..796 | CDD:270432 | 147/371 (40%) | ||
Lig_chan | 556..828 | CDD:278489 | 108/271 (40%) | ||
Grik3 | NP_001106187.1 | PBP1_iGluR_Kainate_GluR5_7 | 34..417 | CDD:107388 | 107/417 (26%) |
ANF_receptor | 55..398 | CDD:279440 | 94/374 (25%) | ||
PBP2_iGluR_Kainate_GluR7 | 433..801 | CDD:270441 | 147/371 (40%) | ||
Lig_chan | 564..832 | CDD:278489 | 108/272 (40%) | ||
Glutamate binding | 690..692 | 1/1 (100%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166349733 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D60688at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100167 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.650 |