Sequence 1: | NP_523484.2 | Gene: | GluRIIA / 33788 | FlyBaseID: | FBgn0004620 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001077280.1 | Gene: | Gria2 / 29627 | RGDID: | 61862 | Length: | 883 | Species: | Rattus norvegicus |
Alignment Length: | 928 | Identity: | 288/928 - (31%) |
---|---|---|---|
Similarity: | 457/928 - (49%) | Gaps: | 116/928 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 VIYAFIIIIGFLEGIIALGGDDRNEITVGAIFYENEKEIELSFDQAFREVNNMKFSELRFVTIKR 71
Fly 72 YMPTND------SFLLQQITCELISNGVAAIFGPSSKAASDIVAQIANATGIPHIEYDLKLEATR 130
Fly 131 QEQLNHQMSINVAPSLSVLSRAYFEIIKSNYEWRTFTLIYETPEGLARLQDLMNIQALNSDYVKL 195
Fly 196 RNLADYADD-----YRILWKETDETFHEQRIILDCEPKTLKELLK--VSIDFKLQGPFRNWFLTH 253
Fly 254 LDTHNSGLR--DIYNEDF-KANITSVRLKVVDANP------FERKKTRLTKVDQILGNQT----M 305
Fly 306 LPILIYDAVVLFASSARNV----IAAMQPFHPPNRHCGSSSPWMLGAFIVNEMKTISEDDVEPHF 366
Fly 367 KTENMKLDEYGQRIHFNLEIYKPTVNEPMMV--WTPDNGIKKRLLNL-ELESAGTTQDFSEQRKV 428
Fly 429 YTVVTHYEEPYFMMKEDHENFRGREKYEGYAVDLISKLSELMEFDYEFMIVNGNGKY---NPETK 490
Fly 491 QWDGIIRKLIDHHAQIGVCDLTITQMRRSVVDFTVPFMQLGISILHYKSPPEPKNQFAFLEPFAV 555
Fly 556 EVWIYMIFAQLIMTLAFVFIARLSYREWLPPNPAIQDPDELE-----NIWNVNNSTWLMVGSIMQ 615
Fly 616 QGCDILPRGPHMRILTGMWWFFALMMLSTYTANLAAFLTSNKWQSSIKSLQDLIEQDKVHFGSMR 680
Fly 681 GGSTSLFFSESNDTDYQRAWNQMKDFNPSAFTSTNKEGVARVRKEKGGYAFLMETTSLTYNIERN 745
Fly 746 -CDLTQIGEQIGEKHYGLAVPLGSDYRTNLSVSILQLSERGELQKMKNKWWKNHNVTCDSYHEVD 809
Fly 810 GDE------LSIIELGGVFLVLAGGVLIGVILGIFEFLWNVQNVAVEERVTPWQAFKAELIFALK 868
Fly 869 FWVRKKPMRISSSSDKSS 886 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIA | NP_523484.2 | PBP1_iGluR_Kainate | 33..404 | CDD:107377 | 96/402 (24%) |
ANF_receptor | 46..386 | CDD:279440 | 90/369 (24%) | ||
PBP2_iGluR_Kainate | 426..796 | CDD:270432 | 155/378 (41%) | ||
Lig_chan | 556..828 | CDD:278489 | 109/283 (39%) | ||
Gria2 | NP_001077280.1 | PBP1_iGluR_AMPA_GluR2 | 28..397 | CDD:107384 | 97/407 (24%) |
ANF_receptor | 56..379 | CDD:279440 | 83/353 (24%) | ||
PBP2_iGluR_AMPA | 413..794 | CDD:270433 | 156/384 (41%) | ||
Glutamate binding | 499..501 | 0/1 (0%) | |||
Lig_chan | 545..824 | CDD:278489 | 110/284 (39%) |