Sequence 1: | NP_523484.2 | Gene: | GluRIIA / 33788 | FlyBaseID: | FBgn0004620 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_502564.2 | Gene: | W02A2.5 / 189098 | WormBaseID: | WBGene00012190 | Length: | 487 | Species: | Caenorhabditis elegans |
Alignment Length: | 519 | Identity: | 101/519 - (19%) |
---|---|---|---|
Similarity: | 193/519 - (37%) | Gaps: | 155/519 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 455 YEGYAVDLISKLSELMEFDYEFM------IVNG--------NGKYNPETKQWDGIIRKLIDHHAQ 505
Fly 506 IGVCDLTI-----TQMRRSVVDFTVPFMQL-GISILHYKSPPEPKNQFAFLEPFAVEVWIYMIFA 564
Fly 565 QLIMTL---------AFVFIARLSYREWLPPNPAIQDPDELENIWNV-----------------N 603
Fly 604 NSTWLMVGSIMQQGCDILPRGPHMRILTGMWWFFALMMLSTYTANLAAFLTSNKWQ--SSIKSLQ 666
Fly 667 DLIEQDKVHFGSMRGGSTSLFFSESNDTDYQ-----RAWNQMKDFNPSAFTSTNKEGVARVRKEK 726
Fly 727 GGYAFLMETTSLTYNIER-NCDLTQIGEQIGE--------KHY-GLAVPLGSDYRTNLSVSILQL 781
Fly 782 SERGELQKMKNKWWKNHNV------TCDSYHEVDGD---ELSIIELGGVFLVLAGGVLIGVILGI 837
Fly 838 FEF--LWNVQNVAVEERV-TPWQAFKAELIFALKFWVRKK-----PMRI-------SSSSDKSS 886 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIA | NP_523484.2 | PBP1_iGluR_Kainate | 33..404 | CDD:107377 | |
ANF_receptor | 46..386 | CDD:279440 | |||
PBP2_iGluR_Kainate | 426..796 | CDD:270432 | 72/403 (18%) | ||
Lig_chan | 556..828 | CDD:278489 | 61/323 (19%) | ||
W02A2.5 | NP_502564.2 | Lig_chan-Glu_bd | <36..86 | CDD:214911 | 10/63 (16%) |
Periplasmic_Binding_Protein_Type_2 | <74..>124 | CDD:304360 | 11/61 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |