Sequence 1: | NP_523484.2 | Gene: | GluRIIA / 33788 | FlyBaseID: | FBgn0004620 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_505601.1 | Gene: | C08B6.5 / 182390 | WormBaseID: | WBGene00007426 | Length: | 423 | Species: | Caenorhabditis elegans |
Alignment Length: | 332 | Identity: | 75/332 - (22%) |
---|---|---|---|
Similarity: | 128/332 - (38%) | Gaps: | 69/332 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 457 GYAVDLISKLSELMEFDY-------EFMIVNGNGKYNPETKQWDGIIRKLIDHHAQIGVCDLTIT 514
Fly 515 QMRRSVVDFTVP---FMQLGISILHYKSPPEPKNQFAFLEPFAVEVWIYMIFAQLIMTLAFVFIA 576
Fly 577 RLSYREWLPPNPAIQDPDELENIWNVNNSTWLMVGSIM--QQGCDILPRGPHMRILTGMWWFFAL 639
Fly 640 MMLSTY-----TANLAA-------FLTSNKWQSSIKSLQDLIEQDKVHFGSMRGGSTSLFFSESN 692
Fly 693 DTDYQRAWNQMKDFNPSAFTSTNKEGVARVRKEKGGYAFLMETTSLTYNIERNCDLTQIGEQIGE 757
Fly 758 KHYGLAV 764 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIA | NP_523484.2 | PBP1_iGluR_Kainate | 33..404 | CDD:107377 | |
ANF_receptor | 46..386 | CDD:279440 | |||
PBP2_iGluR_Kainate | 426..796 | CDD:270432 | 75/332 (23%) | ||
Lig_chan | 556..828 | CDD:278489 | 49/223 (22%) | ||
C08B6.5 | NP_505601.1 | Periplasmic_Binding_Protein_Type_2 | 13..>116 | CDD:304360 | 25/107 (23%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |