Sequence 1: | NP_523484.2 | Gene: | GluRIIA / 33788 | FlyBaseID: | FBgn0004620 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001256640.1 | Gene: | nmr-2 / 180002 | WormBaseID: | WBGene00003775 | Length: | 990 | Species: | Caenorhabditis elegans |
Alignment Length: | 1055 | Identity: | 233/1055 - (22%) |
---|---|---|---|
Similarity: | 403/1055 - (38%) | Gaps: | 257/1055 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 YAFIIIIGFLE--GIIALGG---------DDRNEITVGAIFYENEKEIELSFDQAFREV-----N 57
Fly 58 NMKFSELR-------FVTIKRYMPTNDSFLLQQITC---ELISNGVAAIF-------GPSSKAAS 105
Fly 106 DIVAQIANATGIPHIEYDL-KLEATRQEQLNHQMSINVAPSLSVLSRAYFEIIKSNYEWRTFTLI 169
Fly 170 YETPEGLARLQDLMNIQALNSDYVKLRNLADYADDYRILWKETDETFHEQRIILDCEPKTLKELL 234
Fly 235 KVSIDFKLQGPFRNWFLTHLDTHNSGLRDIYNEDFKANITSVRLKVVDANPFERKKTRLTKVDQI 299
Fly 300 ------------LGNQT----------------------------MLPILIYDAVVLFASSARNV 324
Fly 325 IAAMQPFHP-------PNRHCGSSSP---WMLGAFIVNEMKT-------ISEDDVEPHF-----K 367
Fly 368 T----------ENMKLDEYGQRIHFNLEIYKPTVNEPMMV---WTPDNGIKKRLLNLELESAGTT 419
Fly 420 QDFSEQRKVYTVVTHYEEPYFMMKE---DHENFRGRE---------KY----------------E 456
Fly 457 GYAVDLISKLSELMEFDYEFMIVNGNGKYNPETKQ-WDGIIRKLIDHHAQIGVCDLTITQMRRSV 520
Fly 521 VDFTVPFMQLGISILHYKSPPEPKNQFAFLEPFAVEVWIYMIFAQLIMTLAFVFIARLSYREWLP 585
Fly 586 P---NPAIQDPDELENIWNVNNSTWLMVGSIMQQGCDI-LPRGPHMRILTGMWWFFALMMLSTYT 646
Fly 647 ANLAAFLTSNKWQSSIKSLQDLI------EQDKVHFGSMRGGSTSLFFSESNDTDYQRAWNQMKD 705
Fly 706 F--NPSAFTSTNKEGVARVRKEKGGYAFLMETTSLTY--NIERNCDLTQIGEQIGEKHYGLAVPL 766
Fly 767 GSDYRTNLSVSILQLSERGELQKMKNKWWKNHNVTCDSYHEVDGDELSIIELGGVFLVLAGGVLI 831
Fly 832 GVILGIFEFLWNVQNVAVEERVTP--W-----QAFKAELIFA-----LKFWVRKKPMRISSSSDK 884
Fly 885 SSSRRSSGSRRSSKE 899 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIA | NP_523484.2 | PBP1_iGluR_Kainate | 33..404 | CDD:107377 | 93/468 (20%) |
ANF_receptor | 46..386 | CDD:279440 | 85/434 (20%) | ||
PBP2_iGluR_Kainate | 426..796 | CDD:270432 | 101/412 (25%) | ||
Lig_chan | 556..828 | CDD:278489 | 66/285 (23%) | ||
nmr-2 | NP_001256640.1 | rSAM_ocin_1 | <54..>108 | CDD:274893 | 13/53 (25%) |
Periplasmic_Binding_Protein_type1 | 102..443 | CDD:385651 | 77/399 (19%) | ||
Periplasmic_Binding_Protein_Type_2 | 460..860 | CDD:389745 | 102/419 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |