Sequence 1: | NP_523484.2 | Gene: | GluRIIA / 33788 | FlyBaseID: | FBgn0004620 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006513350.1 | Gene: | Grin3b / 170483 | MGIID: | 2150393 | Length: | 1138 | Species: | Mus musculus |
Alignment Length: | 886 | Identity: | 194/886 - (21%) |
---|---|---|---|
Similarity: | 321/886 - (36%) | Gaps: | 227/886 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 74 PTNDSFLLQQITCELIS--NGVAAIFGPSSKAASDIVAQIANATGIPHIEYDLKLEATRQE---- 132
Fly 133 ---QLNHQMSINVAPSLSVLSRAYFEIIKSNYEWRTFTLI---YETPEGLARL---------QDL 182
Fly 183 MNIQALNSDYVKLR-NLADYADDYRILWK-ETDETFHEQRIILDCEPKTLKELLKVSIDFKLQGP 245
Fly 246 FRNWFL-THLDTHNSGLRDIYNEDFKANITSVRLKVVDANPFERKKTRLTKVDQILG--NQTMLP 307
Fly 308 ILIYDAVVLFASSARNVIAAMQPFHPPNR------HC------GSSSP----------------- 343
Fly 344 ---WMLGAFIVNEMKTISEDDVEPHFKTENMKLDEYGQRIHFNLEIYKPTVNEPMMVWTPDNGIK 405
Fly 406 KRLLN-------LELESAGTTQDFSEQRKVYTVVTHYEEPYFMMKEDHEN--------------- 448
Fly 449 --------FRGREKYE----------GYAVDLISKLSELMEFDYEFMIVNGNGKYNP-ETKQWDG 494
Fly 495 IIRKLIDHHAQIGVCDLTITQMRRSVVDFTVPFMQLGISIL-HYKSPPEPKNQFAFLEPFAVEVW 558
Fly 559 IYMIFAQLIMTLAFVFIARLSYREWLPP---NPAIQDPDELENIWNVNNSTWLMVGSIMQQGCDI 620
Fly 621 L---------PRGPHMRILTGMWWFFALMMLSTYTANLAAFLTSNKWQSSIKSLQDLIEQDKVHF 676
Fly 677 GSMRGGSTSLFFSESNDTDYQRAWNQMKDFNPSAFTSTNKEGVARVRKEKGGY-AFLMETTSLTY 740
Fly 741 --NIERNCDLTQIGEQIGEKHYGLAVPLGSDYRTNLSVSILQLSERGELQKMKNKWWKNHNVTCD 803
Fly 804 S--YHEVDGDELSIIELGGVFLVLAGGVLIGVILGIFEFLW 842 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIA | NP_523484.2 | PBP1_iGluR_Kainate | 33..404 | CDD:107377 | 72/387 (19%) |
ANF_receptor | 46..386 | CDD:279440 | 71/369 (19%) | ||
PBP2_iGluR_Kainate | 426..796 | CDD:270432 | 108/419 (26%) | ||
Lig_chan | 556..828 | CDD:278489 | 71/288 (25%) | ||
Grin3b | XP_006513350.1 | PBP1_iGluR_NMDA_NR3 | 141..481 | CDD:380600 | 73/399 (18%) |
PBP2_iGluR_NMDA_Nr3 | 494..888 | CDD:270438 | 107/418 (26%) | ||
Lig_chan | 656..922 | CDD:365843 | 71/289 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167846268 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.830 |