Sequence 1: | NP_523484.2 | Gene: | GluRIIA / 33788 | FlyBaseID: | FBgn0004620 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005165152.1 | Gene: | gria3a / 170452 | ZFINID: | ZDB-GENE-020125-5 | Length: | 903 | Species: | Danio rerio |
Alignment Length: | 843 | Identity: | 260/843 - (30%) |
---|---|---|---|
Similarity: | 437/843 - (51%) | Gaps: | 74/843 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 YAFIIIIGFLEGIIALGGDDRNEITVGAIFYENEKEIELSFDQAFREVN-NMKFSELRFVTIKRY 72
Fly 73 ----MPTNDSFLLQQITCELISNGVAAIFGPSSKAASDIVAQIANATGIPHIEYDLKLEATRQEQ 133
Fly 134 LNHQMSINVAPSL--SVLSRAYFEIIKSNYEWRTFTLIYETPEGLARLQDLMNIQALNSDYVKLR 196
Fly 197 NLADYAD--DYRILWKETDETFHEQRIILDCEPKTLKELLKVSIDFKLQGPFRNWFLTHLDTHNS 259
Fly 260 GLRDIYNEDFKANITSVRLKVVDANPFERKKTRLTKVDQ-ILGNQTMLPI-----LIYDAVVLFA 318
Fly 319 SSARNVIAAMQPFHPPNRHCGSSS--------PWMLGAFIVNEMKTISEDDVEPHFKTENMKLDE 375
Fly 376 YGQRIHFNLEIY--KPTVNEPMMVWTPDNGIKKRLLNLELESAGTTQDFSEQRKVYTVVTHYEEP 438
Fly 439 YFMMKEDHENFRGREKYEGYAVDLISKLSELMEFDYEFMIVNGNGKY---NPETKQWDGIIRKLI 500
Fly 501 DHHAQIGVCDLTITQMRRSVVDFTVPFMQLGISILHYKSPPEPKNQFAFLEPFAVEVWIYMIFAQ 565
Fly 566 LIMTLAFVFIARLSYREW-LPPNPAIQDPD---ELENIWNVNNSTWLMVGSIMQQGCDILPRGPH 626
Fly 627 MRILTGMWWFFALMMLSTYTANLAAFLTSNKWQSSIKSLQDLIEQDKVHFGSMRGGSTSLFFSES 691
Fly 692 NDTDYQRAWNQMKDFNPSAFTSTNKEGVARVRKEKGGYAFLMETTSLTYNIERN-CDLTQIGEQI 755
Fly 756 GEKHYGLAVPLGSDYRTNLSVSILQLSERGELQKMKNKWW--KNHNVTCDSYHEVDGDELSII 816 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIA | NP_523484.2 | PBP1_iGluR_Kainate | 33..404 | CDD:107377 | 86/395 (22%) |
ANF_receptor | 46..386 | CDD:279440 | 79/362 (22%) | ||
PBP2_iGluR_Kainate | 426..796 | CDD:270432 | 160/379 (42%) | ||
Lig_chan | 556..828 | CDD:278489 | 112/268 (42%) | ||
gria3a | XP_005165152.1 | PBP1_iGluR_AMPA_GluR3 | 28..399 | CDD:107382 | 87/399 (22%) |
ANF_receptor | 39..382 | CDD:279440 | 80/368 (22%) | ||
PBP2_iGluR_AMPA | 415..797 | CDD:270433 | 161/382 (42%) | ||
Lig_chan | 547..810 | CDD:278489 | 112/268 (42%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170591097 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100167 | |
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.740 |