Sequence 1: | NP_523484.2 | Gene: | GluRIIA / 33788 | FlyBaseID: | FBgn0004620 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001350679.1 | Gene: | Grin2b / 14812 | MGIID: | 95821 | Length: | 1482 | Species: | Mus musculus |
Alignment Length: | 911 | Identity: | 203/911 - (22%) |
---|---|---|---|
Similarity: | 349/911 - (38%) | Gaps: | 239/911 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 75 TNDSFLLQQITCELISN----GVAAIFGPSSKAASDIVAQIANATGIPHIEYDLKLEATRQEQLN 135
Fly 136 HQMSINVAPSLSVLSRAYFEIIKSNYEWRTFTLIYETPEGLARLQDLMNIQALNSDYVKLRN--- 197
Fly 198 ------------LADYADDYRILWKETDETFHEQR-------IILDCEPKTLKELLKVSIDFKLQ 243
Fly 244 GPFRNWFLTHLDTHNSGLRDIYNEDFKANITSVRLKVVDANPFERKKTRLTKVDQILGNQTMLPI 308
Fly 309 LIYDAVVLFASSARNVIAAMQPFHPPNRHCGSS------SPWMLGAFIVNEMKTISEDDVEPHFK 367
Fly 368 TENMKLDEYGQRIHFNLEIYKPTVNEPMMVWTPDNGIKKRLLNLE--LESAGTTQDFSEQRKVY- 429
Fly 430 ----------------TVVTHYEEPYFMM-------------------------KEDHENFRGRE 453
Fly 454 KYEGYAVDLISKLSELMEFDYEFMIVNGNGKYNPETK-QWDGIIRKLIDHHAQIGVCDLTITQMR 517
Fly 518 RSVVDFTVPFMQLGISILHYKS--PPEPKNQFAFLEPFAVEVWIYMIFAQLIMTLAFVFI----A 576
Fly 577 RLSYREWL-----PPNPAIQDPDELENIWNVNNSTWLMVGSIMQQGCDIL-PRGPHMRILTGMWW 635
Fly 636 FFALMMLSTYTANLAAFLTSNKWQSSIKSLQDLIEQ------DKVHFGSMRGGSTSLFFSESN-D 693
Fly 694 TDYQRAWNQMKDFNPSAFTSTNKEGV--ARVRKEKGGY-AFLMETTSLTYNIERN--CDLTQI-- 751
Fly 752 GEQIGEKHYGLAVPLGSDYRTNLSVSILQLSERGELQKMKNKWWKN--HNVTCDSYHEVDGDELS 814
Fly 815 IIELGGVFLVLAGGVLIGVILGIFE--FLWN--------------------------VQNVAVEE 851
Fly 852 R 852 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIA | NP_523484.2 | PBP1_iGluR_Kainate | 33..404 | CDD:107377 | 60/360 (17%) |
ANF_receptor | 46..386 | CDD:279440 | 59/342 (17%) | ||
PBP2_iGluR_Kainate | 426..796 | CDD:270432 | 114/438 (26%) | ||
Lig_chan | 556..828 | CDD:278489 | 78/297 (26%) | ||
Grin2b | NP_001350679.1 | PBP1_iGluR_NMDA_NR2 | 33..388 | CDD:380601 | 69/386 (18%) |
PBP2_iGluR_NMDA_Nr2 | 403..803 | CDD:270436 | 112/426 (26%) | ||
NMDAR2_C | 840..1482 | CDD:402274 | 7/41 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167846232 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |