Sequence 1: | NP_523484.2 | Gene: | GluRIIA / 33788 | FlyBaseID: | FBgn0004620 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006509904.1 | Gene: | Gria4 / 14802 | MGIID: | 95811 | Length: | 912 | Species: | Mus musculus |
Alignment Length: | 940 | Identity: | 296/940 - (31%) |
---|---|---|---|
Similarity: | 472/940 - (50%) | Gaps: | 99/940 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 LCPVVIYAFIIIIGFLEGIIALGGDDRNEITVGAIFYENEKEIELSFDQA-FREVNNMKFSELRF 66
Fly 67 VTIKRY--MPTNDSFLLQQITCELISNGVAAIFGPSSKAASDIVAQIANATGIPHIEYDLKLEAT 129
Fly 130 RQEQLNHQMSINVAPSL--SVLSRAYFEIIKSNYEWRTFTLIYETPEGLARLQDLMNIQALNSDY 192
Fly 193 VKLRNLADYAD-DYRILWKETDETFHEQRIILDCEPKTLKELLK--VSIDFKLQGPFRNWFLTHL 254
Fly 255 DTHNSGLRDIYNEDF---KANITSVRLKVVDAN-PFERK-KTRLTKVDQ--ILGNQT---MLPIL 309
Fly 310 IYDAVVLFASSARNV----IAAMQPFHPPNRHCGSSSPWMLGAFIVNEMKTISEDDVEPHFKTEN 370
Fly 371 MKLDEYGQRIHFNLEIYKPTVNEPMMV--WTPDNGIKKRLLNLELESAGTTQDFSEQRKVYTVVT 433
Fly 434 HYEEPYFMMKEDHENFRGREKYEGYAVDLISKLSELMEFDYEFMIVNGNGKY---NPETKQWDGI 495
Fly 496 IRKLIDHHAQIGVCDLTITQMRRSVVDFTVPFMQLGISILHYKSPPEPKNQFAFLEPFAVEVWIY 560
Fly 561 MIFAQLIMTLAFVFIARLSYREWLPPNPAIQD-----PDELENIWNVNNSTWLMVGSIMQQGCDI 620
Fly 621 LPRGPHMRILTGMWWFFALMMLSTYTANLAAFLTSNKWQSSIKSLQDLIEQDKVHFGSMRGGSTS 685
Fly 686 LFFSESNDTDYQRAWNQMKDFNPSAFTSTNKEGVARVRKEKGGYAFLMETTSLTYNIERN-CDLT 749
Fly 750 QIGEQIGEKHYGLAVPLGSDYRTNLSVSILQLSERGELQKMKNKWWKNHNVTC---DSYHEVDGD 811
Fly 812 ELSIIELGGVFLVLAGGVLIGVILGIFEFLWNVQNVAVEERVTPWQAFKAELIFALKFWVRKKPM 876
Fly 877 RISSSSDKS----SSRRSSGSRRSSKEKSR 902 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIA | NP_523484.2 | PBP1_iGluR_Kainate | 33..404 | CDD:107377 | 101/394 (26%) |
ANF_receptor | 46..386 | CDD:279440 | 94/361 (26%) | ||
PBP2_iGluR_Kainate | 426..796 | CDD:270432 | 162/378 (43%) | ||
Lig_chan | 556..828 | CDD:278489 | 115/280 (41%) | ||
Gria4 | XP_006509904.1 | PBP1_iGluR_AMPA_GluR4 | 28..400 | CDD:380611 | 103/401 (26%) |
PBP2_iGluR_AMPA_GluR4 | 414..795 | CDD:270445 | 163/385 (42%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167846260 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1052 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100167 | |
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.740 |