Sequence 1: | NP_523484.2 | Gene: | GluRIIA / 33788 | FlyBaseID: | FBgn0004620 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017949808.1 | Gene: | grik2 / 100495093 | XenbaseID: | XB-GENE-5902331 | Length: | 913 | Species: | Xenopus tropicalis |
Alignment Length: | 925 | Identity: | 303/925 - (32%) |
---|---|---|---|
Similarity: | 474/925 - (51%) | Gaps: | 117/925 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 CPVVIYAFIIIIGFLEG---IIALGGDDRNEITVGAIFYENEK----EIELSFDQAFREVNN--- 58
Fly 59 -MKFSELRFVT--IKRYMPTNDSFLLQQITCELISNGVAAIFGPSSKAASDIVAQIANATGIPHI 120
Fly 121 EYDLKLEATRQEQLNHQMS-------INVAPSLSVLSRAYFEIIKSNYEWRTFTLIYETPEGLAR 178
Fly 179 LQDLMNIQALNSDYVKLRNLADYADDYRILWKE--TDETFHEQRIILDCEPKTLKELLKVSIDFK 241
Fly 242 LQGPFRNWFLTHLDTHNSGLRDIYNEDFK---ANITSVR---------LKVVDANPFERKKTRLT 294
Fly 295 KVDQIL--GNQTMLPILIYDAVVLFASSARNVIAAMQPFHP---PNRHCGSSSPWMLGAFIVNEM 354
Fly 355 KTISEDDVEPHF----------KTENMKLDEYGQRIHFNLEI--YKPTVNEPMMVWTPDNGIKKR 407
Fly 408 LLNLELESAGTTQDFSEQRKVYTVVTHYEEPYFMMKEDHENFRGREKYEGYAVDLISKLSELMEF 472
Fly 473 DYEFMIVNGNGKYNPE---TKQWDGIIRKLIDHHAQIGVCDLTITQMRRSVVDFTVPFMQLGISI 534
Fly 535 LHYKSPPEPKNQFAFLEPFAVEVWIYMIFAQLIMTLAFVFIARLSYREWLPPNPAIQDPDELENI 599
Fly 600 WNVNNSTWLMVGSIMQQGCDILPRGPHMRILTGMWWFFALMMLSTYTANLAAFLTSNKWQSSIKS 664
Fly 665 LQDLIEQDKVHFGSMRGGSTSLFFSESNDTDYQRAWNQMKDFNPSAFTSTNKEGVARVRKEKGGY 729
Fly 730 AFLMETTSLTYNIERNCDLTQIGEQIGEKHYGLAVPLGSDYRTNLSVSILQLSERGELQKMKNKW 794
Fly 795 WKNHNVTCDSYHEVDGDELSIIELGGVFLVLAGGVLIGVILGIFEFLWNVQNVAVEERVTPWQAF 859
Fly 860 KAELIFALKFWVRKK 874 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIIA | NP_523484.2 | PBP1_iGluR_Kainate | 33..404 | CDD:107377 | 111/418 (27%) |
ANF_receptor | 46..386 | CDD:279440 | 104/381 (27%) | ||
PBP2_iGluR_Kainate | 426..796 | CDD:270432 | 157/372 (42%) | ||
Lig_chan | 556..828 | CDD:278489 | 111/271 (41%) | ||
grik2 | XP_017949808.1 | PBP1_iGluR_Kainate | 42..419 | CDD:380605 | 114/432 (26%) |
Periplasmic_Binding_Protein_Type_2 | 435..805 | CDD:419667 | 157/374 (42%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D60688at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |