DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oscillin and nagB

DIOPT Version :10

Sequence 1:NP_608938.1 Gene:Oscillin / 33783 FlyBaseID:FBgn0031717 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_415204.1 Gene:nagB / 945290 ECOCYCID:EG10633 Length:266 Species:Escherichia coli


Alignment Length:255 Identity:154/255 - (60%)
Similarity:205/255 - (80%) Gaps:0/255 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTPLGMYKELIEFHKQGKVSFQY 65
            |||:.|.|::.||||||::::.|||.|:|:|||.||||||||.||:..||.|:|.||.|:|||::
E. coli     1 MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQVSFKH 65

  Fly    66 VKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIEPKNVHILDGNAADLVAECNKFEDQIREAGG 130
            |.||||||||||.::|.|||:.||..|||.|:||..:|:::|:|||.|:.|||.::|::||..|.
E. coli    66 VVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQYEEKIRSYGK 130

  Fly   131 VELFIGGIGPDGHIAFNEPGSSLVSRTRVKTLAQDTLEANARFFDNDMSKVPKQALTVGVGTVMD 195
            :.||:||:|.|||||||||.|||.||||:|||..||..||:||||||:::|||.||||||||::|
E. coli   131 IHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLD 195

  Fly   196 SKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLMICDEDATLELRVKTVKYF 255
            ::|||||:.|:.||.||..|:|..||||||:|..|.|...:|:|||.:|:||:|||::||
E. coli   196 AEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYF 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OscillinNP_608938.1 SugarP_isomerase 1..253 CDD:469729 152/251 (61%)
nagBNP_415204.1 nagB 1..259 CDD:129593 154/255 (60%)

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