DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oscillin and Gnpda1

DIOPT Version :9

Sequence 1:NP_001245894.1 Gene:Oscillin / 33783 FlyBaseID:FBgn0031717 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001128467.1 Gene:Gnpda1 / 683570 RGDID:1585624 Length:289 Species:Rattus norvegicus


Alignment Length:259 Identity:198/259 - (76%)
Similarity:226/259 - (87%) Gaps:0/259 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTPLGMYKELIEFHKQGKVSFQY 65
            |:|:|||......:|||||:..||..|.|..|:||.|||||||||||.|::|||::|.|.:||:|
  Rat     1 MKLIILEHYSQASEWAAKYIRNRIIQFNPGPDKYFTLGLPTGSTPLGCYQKLIEYYKNGDLSFKY 65

  Fly    66 VKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIEPKNVHILDGNAADLVAECNKFEDQIREAGG 130
            ||||||||||||.|:|.||||.||||||||||||.|:|.||||||||||.|||:.||::|:.|||
  Rat    66 VKTFNMDEYVGLPREHPESYHSFMWNNFFKHIDIHPENTHILDGNAADLQAECDSFEEKIQAAGG 130

  Fly   131 VELFIGGIGPDGHIAFNEPGSSLVSRTRVKTLAQDTLEANARFFDNDMSKVPKQALTVGVGTVMD 195
            :|||:||||||||||||||||||||||||||||.||:.|||||||.|::|||..|||||||||||
  Rat   131 IELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGDLAKVPTMALTVGVGTVMD 195

  Fly   196 SKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLMICDEDATLELRVKTVKYFKGIL 259
            :||||||||||||||||||||||||||||||||||||..|:.:|||||||||:|||||||||::
  Rat   196 AKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGLM 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OscillinNP_001245894.1 SugarP_isomerase 1..253 CDD:294243 192/251 (76%)
Gnpda1NP_001128467.1 SugarP_isomerase 1..253 CDD:412321 192/251 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354306
Domainoid 1 1.000 47 1.000 Domainoid score I11700
eggNOG 1 0.900 - - E1_COG0363
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 427 1.000 Inparanoid score I1683
OMA 1 1.010 - - QHG62665
OrthoDB 1 1.010 - - D1425290at2759
OrthoFinder 1 1.000 - - FOG0003116
OrthoInspector 1 1.000 - - otm44869
orthoMCL 1 0.900 - - OOG6_102139
Panther 1 1.100 - - O PTHR11280
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2086
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.810

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