DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oscillin and gnpda1

DIOPT Version :9

Sequence 1:NP_001245894.1 Gene:Oscillin / 33783 FlyBaseID:FBgn0031717 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001017867.1 Gene:gnpda1 / 550565 ZFINID:ZDB-GENE-050417-417 Length:269 Species:Danio rerio


Alignment Length:259 Identity:198/259 - (76%)
Similarity:223/259 - (86%) Gaps:0/259 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTPLGMYKELIEFHKQGKVSFQY 65
            |:|:||...|.|.:|||||:..||..|.|..:|:|.|||||||||||.||:|||:||:|::||||
Zfish     1 MKLIILNDYDQVSEWAAKYIRNRIRKFNPGPERFFTLGLPTGSTPLGCYKKLIEYHKKGEISFQY 65

  Fly    66 VKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIEPKNVHILDGNAADLVAECNKFEDQIREAGG 130
            ||||||||||||.|||.||||.||||||||||||..:|.|||||||.:|..||..||.:|:.|||
Zfish    66 VKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDIRAENAHILDGNAPNLEKECQDFEAKIKAAGG 130

  Fly   131 VELFIGGIGPDGHIAFNEPGSSLVSRTRVKTLAQDTLEANARFFDNDMSKVPKQALTVGVGTVMD 195
            :|||:||||||||||||||||||||||||||||.||:.|||||||.|:||||..|||||||||||
Zfish   131 IELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGDLSKVPTMALTVGVGTVMD 195

  Fly   196 SKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLMICDEDATLELRVKTVKYFKGIL 259
            ::||||||||:||||||||||||||||||||||||||..|:.:||||||.|||||||||||||:
Zfish   196 AREVMILITGSHKAFALYKAIEEGVNHMWTVSAFQQHPQTVFVCDEDATQELRVKTVKYFKGII 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OscillinNP_001245894.1 SugarP_isomerase 1..253 CDD:294243 191/251 (76%)
gnpda1NP_001017867.1 nagB 1..258 CDD:179028 196/256 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596591
Domainoid 1 1.000 375 1.000 Domainoid score I832
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 428 1.000 Inparanoid score I1711
OMA 1 1.010 - - QHG62665
OrthoDB 1 1.010 - - D1425290at2759
OrthoFinder 1 1.000 - - FOG0003116
OrthoInspector 1 1.000 - - otm25880
orthoMCL 1 0.900 - - OOG6_102139
Panther 1 1.100 - - O PTHR11280
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2549
SonicParanoid 1 1.000 - - X2086
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.900

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