DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oscillin and Pgls

DIOPT Version :10

Sequence 1:NP_608938.1 Gene:Oscillin / 33783 FlyBaseID:FBgn0031717 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001099536.1 Gene:Pgls / 290636 RGDID:1307001 Length:291 Species:Rattus norvegicus


Alignment Length:260 Identity:62/260 - (23%)
Similarity:101/260 - (38%) Gaps:26/260 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTPLGMYKEL-IEFHKQGKVSFQYVKT 68
            :..:...:|...|:.|.:|...........|.|||..||....:.::| ......|..||.....
  Rat    45 VFSSPQELGASLAQLVAQRAASCLEGNRGRFALGLSGGSLVSMLARDLPAATAPAGPASFARWTL 109

  Fly    69 FNMDEYVGLARDHHESYHYFMWNNFFKHIDIEPKNVHILDGNAADLVAECNKFEDQIREA--GGV 131
            ...||.: :..||.||.:.....:....:.|....|..:| .|..:......:..::|:|  |..
  Rat   110 GFCDERL-VPFDHAESTYGLYRTHLLSKLPIPDSQVLTID-PALPVEDAAEDYARKLRQAFQGDT 172

  Fly   132 ----ELFIGGIGPDGHIAFNEPGSSLVSRTRVKTLAQDTLEANARFFDNDMSKVPKQALTVGVGT 192
                :|.|.|:|||||.....||..|: :.|.|.:|.          ..|..|.|.|.:|:.:..
  Rat   173 VPVFDLLILGVGPDGHTCSLFPGHPLL-QEREKIVAP----------IGDSPKPPPQRVTLTLPV 226

  Fly   193 VMDSKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLMIC---DEDATLELRVKTVKY 254
            :..::.|:.:.||..||..|.:.:|:..:   .:.|......|..:|   ||.|...|.|...|:
  Rat   227 LNAAQSVIFVATGEGKAAVLKRILEDQES---ALPAAMVQPRTGALCWFLDEAAARLLSVPFEKH 288

  Fly   255  254
              Rat   289  288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OscillinNP_608938.1 SugarP_isomerase 1..253 CDD:469729 61/257 (24%)
PglsNP_001099536.1 Glucosamine_iso 47..271 CDD:460101 55/239 (23%)

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