DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oscillin and Gnpda2

DIOPT Version :9

Sequence 1:NP_001245894.1 Gene:Oscillin / 33783 FlyBaseID:FBgn0031717 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001099475.1 Gene:Gnpda2 / 289608 RGDID:1305521 Length:276 Species:Rattus norvegicus


Alignment Length:259 Identity:200/259 - (77%)
Similarity:229/259 - (88%) Gaps:0/259 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTPLGMYKELIEFHKQGKVSFQY 65
            ||||||:..|...:|||||:..||..|:|..||||.|||||||||||.||:|||:||.|.:||:|
  Rat     1 MRLVILDNYDLASEWAAKYICNRIIKFKPGQDRYFSLGLPTGSTPLGCYKKLIEYHKSGNLSFKY 65

  Fly    66 VKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIEPKNVHILDGNAADLVAECNKFEDQIREAGG 130
            ||||||||||||.|:|.||||.:|||||||||||:|.|.||||||||||.|||:.||::|:||||
  Rat    66 VKTFNMDEYVGLPRNHPESYHSYMWNNFFKHIDIDPNNAHILDGNAADLQAECDAFEEKIKEAGG 130

  Fly   131 VELFIGGIGPDGHIAFNEPGSSLVSRTRVKTLAQDTLEANARFFDNDMSKVPKQALTVGVGTVMD 195
            ::||:|||||||||||||||||||||||:||||.||:.|||::||.|:||||..|||||||||||
  Rat   131 IDLFVGGIGPDGHIAFNEPGSSLVSRTRLKTLAMDTILANAKYFDGDLSKVPTMALTVGVGTVMD 195

  Fly   196 SKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLMICDEDATLELRVKTVKYFKGIL 259
            ::|||||||||||||||||||||||||||||||||||..|:.:|||||||||||||||||||::
  Rat   196 AREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGLM 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OscillinNP_001245894.1 SugarP_isomerase 1..253 CDD:294243 194/251 (77%)
Gnpda2NP_001099475.1 SugarP_isomerase 1..253 CDD:412321 194/251 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354307
Domainoid 1 1.000 374 1.000 Domainoid score I851
eggNOG 1 0.900 - - E1_COG0363
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12381
Inparanoid 1 1.050 427 1.000 Inparanoid score I1683
OMA 1 1.010 - - QHG62665
OrthoDB 1 1.010 - - D1425290at2759
OrthoFinder 1 1.000 - - FOG0003116
OrthoInspector 1 1.000 - - otm44869
orthoMCL 1 0.900 - - OOG6_102139
Panther 1 1.100 - - LDO PTHR11280
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2086
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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