DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oscillin and Gnpda1

DIOPT Version :10

Sequence 1:NP_608938.1 Gene:Oscillin / 33783 FlyBaseID:FBgn0031717 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_036067.2 Gene:Gnpda1 / 26384 MGIID:1347054 Length:289 Species:Mus musculus


Alignment Length:259 Identity:200/259 - (77%)
Similarity:226/259 - (87%) Gaps:0/259 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTPLGMYKELIEFHKQGKVSFQY 65
            |:|:|||......:|||||:..||..|.|..|:||.|||||||||||.|::|||::|.|.:||||
Mouse     1 MKLIILEHYSQASEWAAKYIRNRIIQFNPGPDKYFTLGLPTGSTPLGCYQKLIEYYKNGDLSFQY 65

  Fly    66 VKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIEPKNVHILDGNAADLVAECNKFEDQIREAGG 130
            ||||||||||||.|||.||||.||||||||||||.|:|.||||||||||.|||:.||::|:.|||
Mouse    66 VKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDIHPENTHILDGNAADLQAECDAFEEKIQAAGG 130

  Fly   131 VELFIGGIGPDGHIAFNEPGSSLVSRTRVKTLAQDTLEANARFFDNDMSKVPKQALTVGVGTVMD 195
            :|||:||||||||||||||||||||||||||||.||:.|||||||.|::|||..|||||||||||
Mouse   131 IELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGDLAKVPTMALTVGVGTVMD 195

  Fly   196 SKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLMICDEDATLELRVKTVKYFKGIL 259
            :||||||||||||||||||||||||||||||||||||..|:.:|||||||||:|||||||||::
Mouse   196 AKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGLM 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OscillinNP_608938.1 SugarP_isomerase 1..253 CDD:469729 194/251 (77%)
Gnpda1NP_036067.2 SugarP_isomerase 1..253 CDD:469729 194/251 (77%)

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