DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oscillin and Gnpda1

DIOPT Version :9

Sequence 1:NP_001245894.1 Gene:Oscillin / 33783 FlyBaseID:FBgn0031717 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_036067.2 Gene:Gnpda1 / 26384 MGIID:1347054 Length:289 Species:Mus musculus


Alignment Length:259 Identity:200/259 - (77%)
Similarity:226/259 - (87%) Gaps:0/259 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTPLGMYKELIEFHKQGKVSFQY 65
            |:|:|||......:|||||:..||..|.|..|:||.|||||||||||.|::|||::|.|.:||||
Mouse     1 MKLIILEHYSQASEWAAKYIRNRIIQFNPGPDKYFTLGLPTGSTPLGCYQKLIEYYKNGDLSFQY 65

  Fly    66 VKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIEPKNVHILDGNAADLVAECNKFEDQIREAGG 130
            ||||||||||||.|||.||||.||||||||||||.|:|.||||||||||.|||:.||::|:.|||
Mouse    66 VKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDIHPENTHILDGNAADLQAECDAFEEKIQAAGG 130

  Fly   131 VELFIGGIGPDGHIAFNEPGSSLVSRTRVKTLAQDTLEANARFFDNDMSKVPKQALTVGVGTVMD 195
            :|||:||||||||||||||||||||||||||||.||:.|||||||.|::|||..|||||||||||
Mouse   131 IELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGDLAKVPTMALTVGVGTVMD 195

  Fly   196 SKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLMICDEDATLELRVKTVKYFKGIL 259
            :||||||||||||||||||||||||||||||||||||..|:.:|||||||||:|||||||||::
Mouse   196 AKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGLM 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OscillinNP_001245894.1 SugarP_isomerase 1..253 CDD:294243 194/251 (77%)
Gnpda1NP_036067.2 SugarP_isomerase 1..253 CDD:294243 194/251 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850609
Domainoid 1 1.000 373 1.000 Domainoid score I883
eggNOG 1 0.900 - - E1_COG0363
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 426 1.000 Inparanoid score I1739
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62665
OrthoDB 1 1.010 - - D1425290at2759
OrthoFinder 1 1.000 - - FOG0003116
OrthoInspector 1 1.000 - - otm42803
orthoMCL 1 0.900 - - OOG6_102139
Panther 1 1.100 - - O PTHR11280
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2549
SonicParanoid 1 1.000 - - X2086
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.800

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