DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oscillin and gnpda1

DIOPT Version :9

Sequence 1:NP_001245894.1 Gene:Oscillin / 33783 FlyBaseID:FBgn0031717 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_002935304.2 Gene:gnpda1 / 100380029 XenbaseID:XB-GENE-966376 Length:289 Species:Xenopus tropicalis


Alignment Length:259 Identity:201/259 - (77%)
Similarity:228/259 - (88%) Gaps:0/259 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRLVILETSDSVGKWAAKYVMKRINDFQPSADRYFVLGLPTGSTPLGMYKELIEFHKQGKVSFQY 65
            |:|:||:..|...:|||||:..||..:.|:||:||.|||||||||||.||:|||:||.|.:||:|
 Frog     1 MKLIILDDYDQASEWAAKYIRNRIIQYNPTADKYFTLGLPTGSTPLGCYKKLIEYHKNGDLSFKY 65

  Fly    66 VKTFNMDEYVGLARDHHESYHYFMWNNFFKHIDIEPKNVHILDGNAADLVAECNKFEDQIREAGG 130
            ||||||||||||.|:|.||||.||||||||||||..:|.|||||||.||.|||:.||::||.|||
 Frog    66 VKTFNMDEYVGLPREHPESYHSFMWNNFFKHIDISAENAHILDGNATDLQAECDLFEEKIRAAGG 130

  Fly   131 VELFIGGIGPDGHIAFNEPGSSLVSRTRVKTLAQDTLEANARFFDNDMSKVPKQALTVGVGTVMD 195
            :|||:||||||||||||||||||||||||||||.||:.|||||||.::||||..|||||||||||
 Frog   131 IELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGNLSKVPTMALTVGVGTVMD 195

  Fly   196 SKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLMICDEDATLELRVKTVKYFKGIL 259
            |||||||||||||||||||||||||||||||||||||.:|:.:|||||||||||||||||||::
 Frog   196 SKEVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPSTVFVCDEDATLELRVKTVKYFKGLM 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OscillinNP_001245894.1 SugarP_isomerase 1..253 CDD:294243 195/251 (78%)
gnpda1XP_002935304.2 SugarP_isomerase 1..253 CDD:412321 195/251 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 375 1.000 Domainoid score I865
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 426 1.000 Inparanoid score I1719
OMA 1 1.010 - - QHG62665
OrthoDB 1 1.010 - - D1425290at2759
OrthoFinder 1 1.000 - - FOG0003116
OrthoInspector 1 1.000 - - otm47914
Panther 1 1.100 - - O PTHR11280
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2549
SonicParanoid 1 1.000 - - X2086
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.110

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