| Sequence 1: | NP_001245892.1 | Gene: | Lam / 33782 | FlyBaseID: | FBgn0002525 | Length: | 622 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_113971.1 | Gene: | Nefl / 83613 | RGDID: | 621458 | Length: | 542 | Species: | Rattus norvegicus |
| Alignment Length: | 517 | Identity: | 138/517 - (26%) |
|---|---|---|---|
| Similarity: | 238/517 - (46%) | Gaps: | 85/517 - (16%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 SSKSRRAGTATPQPGNTSTPRPPSAGPQPPPPSTH----SQTASSPLSPTRHSRVAEKVELQNLN 62
Fly 63 DRLATYIDRVRNLETENSRLTIEVQTTRDTVTRETTNIKNIFEAELLETRRLLDDTARDRARAEI 127
Fly 128 DIKRLWEENEELKNKLDKKTKECTTAEGNVRMYESRANELNNKYNQANADRKKLNEDLNEALKEL 192
Fly 193 ERLRKQFEETRKNLEQETLSRVDLENTIQSLREELSFKDQIHSQEINESRRIKQTEYSEIDGRLS 257
Fly 258 SEYDAKLKQSLQELRAQYEEQMQINRDEIQSLYEDKIQRLQEAAARTSNSTHKSIEELRSTRVRI 322
Fly 323 DALNANINELEQANADLNARIRDLERQLDNDRERHGQEIDLLEKELIRLREEMTQQLKEYQDLMD 387
Fly 388 IKVSLDLEIAAYDKLLVGEEARLNITPATNTATVQSFSQS-----------LRNSTRATPSRRTP 441
Fly 442 ---SAAVKRKRAVVDESEDHSVADYYVSASAK------GNVEIKEIDPEGKFVRLFNKGSEE 494 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Lam | NP_001245892.1 | Filament | 54..409 | CDD:278467 | 104/354 (29%) |
| Ax_dynein_light | <283..377 | CDD:287215 | 20/93 (22%) | ||
| LTD | 466..572 | CDD:279300 | 9/35 (26%) | ||
| Nefl | NP_113971.1 | Head | 2..93 | 13/58 (22%) | |
| Filament_head | 9..88 | CDD:282575 | 10/53 (19%) | ||
| Filament | 89..400 | CDD:278467 | 104/355 (29%) | ||
| Coil 1A | 94..125 | 18/52 (35%) | |||
| Linker 1 | 126..138 | 3/11 (27%) | |||
| Coil 1B | 139..234 | 27/115 (23%) | |||
| GBP_C | <140..239 | CDD:303769 | 29/121 (24%) | ||
| coiled coil | 212..222 | CDD:293879 | 4/9 (44%) | ||
| Linker 12 | 235..253 | 3/19 (16%) | |||
| Coil 2A | 254..272 | 7/17 (41%) | |||
| Linker 2 | 273..281 | 1/7 (14%) | |||
| Coil 2B | 282..397 | 38/114 (33%) | |||
| Epitope, recognized by IF-specific monoclonal antibody | 382..392 | 7/9 (78%) | |||
| Tail | 398..542 | 24/108 (22%) | |||
| Tail, subdomain A | 398..444 | 11/47 (23%) | |||
| Tail, subdomain B (acidic) | 445..542 | 13/59 (22%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 451..542 | 12/53 (23%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||