| Sequence 1: | NP_001245892.1 | Gene: | Lam / 33782 | FlyBaseID: | FBgn0002525 | Length: | 622 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_003371.2 | Gene: | VIM / 7431 | HGNCID: | 12692 | Length: | 466 | Species: | Homo sapiens |
| Alignment Length: | 506 | Identity: | 141/506 - (27%) |
|---|---|---|---|
| Similarity: | 239/506 - (47%) | Gaps: | 101/506 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 SSKSRR----AGTATPQPGN-----TSTPRPPSAGPQPPPPSTHSQTASSP--LSPTRHS----- 50
Fly 51 ----------------------------RVAEKVELQNLNDRLATYIDRVRNLETENSRLTIEVQ 87
Fly 88 TTRDTVTRETTNIKNIFEAELLETRRLLDDTARDRARAEIDIKRLWEENEELKNKLDKKTKECTT 152
Fly 153 AEGNVRMYESRANELNNKYNQANADRKKLNEDLNEALKELERLRKQFEETRKNLEQETLSRVDLE 217
Fly 218 NTIQSLREELSFKDQIHSQEINESRRIKQTEYSEIDGRLSSEYDAKLKQSLQELRAQYEEQMQIN 282
Fly 283 RDEIQSLYEDKIQRLQEAAARTSNSTHKSIEELRSTRVRIDALNANINELEQANADLNARIRDLE 347
Fly 348 RQLDNDRERHGQEIDLLEKELIRLREEMTQQLKEYQDLMDIKVSLDLEIAAYDKLLVGEEARLNI 412
Fly 413 TPATNTATVQSFSQSLRNSTRA-TPSRRTPSAAVK----RKRAVVDESEDH 458 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Lam | NP_001245892.1 | Filament | 54..409 | CDD:278467 | 106/354 (30%) |
| Ax_dynein_light | <283..377 | CDD:287215 | 22/93 (24%) | ||
| LTD | 466..572 | CDD:279300 | |||
| VIM | NP_003371.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..32 | 8/24 (33%) | |
| Head | 2..95 | 21/87 (24%) | |||
| Filament_head | 14..101 | CDD:368088 | 17/87 (20%) | ||
| Coil 1A | 96..131 | 20/34 (59%) | |||
| Filament | 102..410 | CDD:365827 | 106/355 (30%) | ||
| Linker 1 | 132..153 | 2/23 (9%) | |||
| Coil 1B | 154..245 | 30/132 (23%) | |||
| Linker 12 | 246..268 | 5/24 (21%) | |||
| Coil 2 | 269..407 | 44/137 (32%) | |||
| [IL]-x-C-x-x-[DE] motif. /evidence=ECO:0000305|PubMed:25417112 | 326..329 | 1/2 (50%) | |||
| Tail | 408..466 | 14/57 (25%) | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG0977 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||